Hb_000967_030

Information

Type -
Description -
Location Contig967: 44412-45448
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000967_030 0.0 - - -
2 Hb_000159_030 0.0176682582 - - putative glycosyltransferase, partial [Aralia elata]
3 Hb_159957_020 0.0193773022 - - -
4 Hb_019299_050 0.0398635687 - - -
5 Hb_055880_010 0.0427896083 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_009142_030 0.0457938361 - - UDP-glucosyltransferase, putative [Ricinus communis]
7 Hb_001514_160 0.0477361386 - - hypothetical protein JCGZ_16070 [Jatropha curcas]
8 Hb_014034_010 0.0524299016 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
9 Hb_002890_050 0.0533995574 - - -
10 Hb_001221_120 0.0558576889 - - cytochrome P450, putative [Ricinus communis]
11 Hb_005625_050 0.0616713274 - - hypothetical protein PRUPE_ppa024499mg, partial [Prunus persica]
12 Hb_007757_090 0.0694529871 - - PREDICTED: uncharacterized protein LOC105793478 [Gossypium raimondii]
13 Hb_006261_010 0.0758517545 - - PREDICTED: uncharacterized protein LOC104110884 [Nicotiana tomentosiformis]
14 Hb_000946_020 0.1106449139 - - hypothetical protein PRUPE_ppa023262mg [Prunus persica]
15 Hb_039791_010 0.128013994 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like isoform X2 [Jatropha curcas]
16 Hb_018202_060 0.1300104035 - - PREDICTED: germin-like protein subfamily 1 member 13 [Jatropha curcas]
17 Hb_169597_010 0.135552241 - - PREDICTED: uncharacterized protein LOC104903465 [Beta vulgaris subsp. vulgaris]
18 Hb_003927_030 0.1407214406 - - unnamed protein product [Coffea canephora]
19 Hb_000052_030 0.1420504149 - - -
20 Hb_001959_280 0.1604106645 - - PREDICTED: uncharacterized protein LOC105638432 [Jatropha curcas]

Gene co-expression network

sample Hb_000967_030 Hb_000967_030 Hb_000159_030 Hb_000159_030 Hb_000967_030--Hb_000159_030 Hb_159957_020 Hb_159957_020 Hb_000967_030--Hb_159957_020 Hb_019299_050 Hb_019299_050 Hb_000967_030--Hb_019299_050 Hb_055880_010 Hb_055880_010 Hb_000967_030--Hb_055880_010 Hb_009142_030 Hb_009142_030 Hb_000967_030--Hb_009142_030 Hb_001514_160 Hb_001514_160 Hb_000967_030--Hb_001514_160 Hb_000159_030--Hb_159957_020 Hb_000159_030--Hb_055880_010 Hb_000159_030--Hb_009142_030 Hb_000159_030--Hb_001514_160 Hb_014034_010 Hb_014034_010 Hb_000159_030--Hb_014034_010 Hb_159957_020--Hb_055880_010 Hb_159957_020--Hb_009142_030 Hb_159957_020--Hb_001514_160 Hb_159957_020--Hb_014034_010 Hb_005625_050 Hb_005625_050 Hb_019299_050--Hb_005625_050 Hb_007757_090 Hb_007757_090 Hb_019299_050--Hb_007757_090 Hb_006261_010 Hb_006261_010 Hb_019299_050--Hb_006261_010 Hb_019299_050--Hb_000159_030 Hb_019299_050--Hb_159957_020 Hb_055880_010--Hb_009142_030 Hb_055880_010--Hb_001514_160 Hb_055880_010--Hb_014034_010 Hb_002890_050 Hb_002890_050 Hb_055880_010--Hb_002890_050 Hb_001221_120 Hb_001221_120 Hb_055880_010--Hb_001221_120 Hb_009142_030--Hb_001514_160 Hb_009142_030--Hb_014034_010 Hb_009142_030--Hb_002890_050 Hb_009142_030--Hb_001221_120 Hb_001514_160--Hb_014034_010 Hb_001514_160--Hb_002890_050 Hb_001514_160--Hb_001221_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.718744 0.269772

CAGE analysis