Hb_031474_020

Information

Type -
Description -
Location Contig31474: 18212-19080
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031474_020 0.0 - - -
2 Hb_002003_120 0.2450557069 - - PREDICTED: ubiquitin-like-conjugating enzyme ATG10 isoform X1 [Jatropha curcas]
3 Hb_142051_010 0.2450898404 - - -
4 Hb_003297_040 0.2469935675 - - Disease resistance protein RPM1, putative [Ricinus communis]
5 Hb_108557_010 0.2573746949 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
6 Hb_008489_010 0.2623560409 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
7 Hb_000832_340 0.2701323293 - - PREDICTED: psbP-like protein 2, chloroplastic isoform X3 [Nelumbo nucifera]
8 Hb_002809_090 0.2722699193 - - -
9 Hb_161728_010 0.2741810737 - - hypothetical protein JCGZ_11176 [Jatropha curcas]
10 Hb_089299_010 0.2761433581 - - conserved hypothetical protein [Ricinus communis]
11 Hb_097933_010 0.2800894206 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like isoform X1 [Jatropha curcas]
12 Hb_006810_010 0.2827976896 - - hypothetical protein B456_012G018200 [Gossypium raimondii]
13 Hb_003057_030 0.2831578905 - - hypothetical protein JCGZ_06668 [Jatropha curcas]
14 Hb_029510_080 0.283241186 - - -
15 Hb_000072_040 0.2854170453 - - -
16 Hb_001172_030 0.2859950124 - - PREDICTED: protein NRT1/ PTR FAMILY 7.2-like isoform X1 [Jatropha curcas]
17 Hb_018202_060 0.286803045 - - PREDICTED: germin-like protein subfamily 1 member 13 [Jatropha curcas]
18 Hb_001949_010 0.2890344206 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
19 Hb_026284_010 0.2904707254 - - -
20 Hb_007757_090 0.2933661637 - - PREDICTED: uncharacterized protein LOC105793478 [Gossypium raimondii]

Gene co-expression network

sample Hb_031474_020 Hb_031474_020 Hb_002003_120 Hb_002003_120 Hb_031474_020--Hb_002003_120 Hb_142051_010 Hb_142051_010 Hb_031474_020--Hb_142051_010 Hb_003297_040 Hb_003297_040 Hb_031474_020--Hb_003297_040 Hb_108557_010 Hb_108557_010 Hb_031474_020--Hb_108557_010 Hb_008489_010 Hb_008489_010 Hb_031474_020--Hb_008489_010 Hb_000832_340 Hb_000832_340 Hb_031474_020--Hb_000832_340 Hb_002003_120--Hb_003297_040 Hb_115414_010 Hb_115414_010 Hb_002003_120--Hb_115414_010 Hb_035726_010 Hb_035726_010 Hb_002003_120--Hb_035726_010 Hb_039791_010 Hb_039791_010 Hb_002003_120--Hb_039791_010 Hb_001221_120 Hb_001221_120 Hb_002003_120--Hb_001221_120 Hb_002809_090 Hb_002809_090 Hb_142051_010--Hb_002809_090 Hb_089299_010 Hb_089299_010 Hb_142051_010--Hb_089299_010 Hb_029510_080 Hb_029510_080 Hb_142051_010--Hb_029510_080 Hb_003057_030 Hb_003057_030 Hb_142051_010--Hb_003057_030 Hb_161728_010 Hb_161728_010 Hb_142051_010--Hb_161728_010 Hb_000906_120 Hb_000906_120 Hb_142051_010--Hb_000906_120 Hb_006856_020 Hb_006856_020 Hb_003297_040--Hb_006856_020 Hb_000832_350 Hb_000832_350 Hb_003297_040--Hb_000832_350 Hb_001496_020 Hb_001496_020 Hb_003297_040--Hb_001496_020 Hb_011618_020 Hb_011618_020 Hb_003297_040--Hb_011618_020 Hb_006261_010 Hb_006261_010 Hb_003297_040--Hb_006261_010 Hb_007757_090 Hb_007757_090 Hb_003297_040--Hb_007757_090 Hb_004228_040 Hb_004228_040 Hb_108557_010--Hb_004228_040 Hb_002090_010 Hb_002090_010 Hb_108557_010--Hb_002090_010 Hb_002888_080 Hb_002888_080 Hb_108557_010--Hb_002888_080 Hb_157029_010 Hb_157029_010 Hb_108557_010--Hb_157029_010 Hb_064106_010 Hb_064106_010 Hb_108557_010--Hb_064106_010 Hb_135684_010 Hb_135684_010 Hb_008489_010--Hb_135684_010 Hb_015227_010 Hb_015227_010 Hb_008489_010--Hb_015227_010 Hb_008489_010--Hb_115414_010 Hb_010866_010 Hb_010866_010 Hb_008489_010--Hb_010866_010 Hb_169514_010 Hb_169514_010 Hb_008489_010--Hb_169514_010 Hb_001172_030 Hb_001172_030 Hb_008489_010--Hb_001172_030 Hb_005207_010 Hb_005207_010 Hb_000832_340--Hb_005207_010 Hb_002233_050 Hb_002233_050 Hb_000832_340--Hb_002233_050 Hb_003159_070 Hb_003159_070 Hb_000832_340--Hb_003159_070 Hb_000832_340--Hb_029510_080 Hb_000832_340--Hb_003057_030 Hb_177772_010 Hb_177772_010 Hb_000832_340--Hb_177772_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0891555 0 0 0.102651
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.647008 0.346376

CAGE analysis