Hb_177772_010

Information

Type -
Description -
Location Contig177772: 40-788
Sequence    

Annotation

kegg
ID vvi:100250918
description receptor-like protein 12
nr
ID XP_010662268.1
description PREDICTED: receptor-like protein 12 isoform X2 [Vitis vinifera]
swissprot
ID Q9C9H7
description Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2
trembl
ID A0A067KEQ5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11135 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_177772_010 0.0 - - PREDICTED: receptor-like protein 12 isoform X2 [Vitis vinifera]
2 Hb_003159_070 0.0707677748 - - Uncharacterized protein TCM_035723 [Theobroma cacao]
3 Hb_161728_010 0.0945499382 - - hypothetical protein JCGZ_11176 [Jatropha curcas]
4 Hb_003057_030 0.104686347 - - hypothetical protein JCGZ_06668 [Jatropha curcas]
5 Hb_029510_080 0.1091643208 - - -
6 Hb_002809_090 0.1272326802 - - -
7 Hb_005207_010 0.145016406 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2-like [Jatropha curcas]
8 Hb_000649_260 0.1554699828 - - uncharacterized LOC105634108 [Jatropha curcas]
9 Hb_002233_050 0.1662769032 - - PREDICTED: uncharacterized protein LOC104879391 [Vitis vinifera]
10 Hb_142051_010 0.185215433 - - -
11 Hb_001019_210 0.1942089621 - - PREDICTED: protein kinase PINOID 2 [Gossypium raimondii]
12 Hb_004519_010 0.2053174943 - - PREDICTED: basic form of pathogenesis-related protein 1-like [Jatropha curcas]
13 Hb_005831_010 0.2184919847 - - hypothetical protein JCGZ_04003 [Jatropha curcas]
14 Hb_000832_340 0.2187804429 - - PREDICTED: psbP-like protein 2, chloroplastic isoform X3 [Nelumbo nucifera]
15 Hb_000230_020 0.219039819 - - cysteine synthase, putative [Ricinus communis]
16 Hb_138229_010 0.2190445525 - - hypothetical protein JCGZ_05736 [Jatropha curcas]
17 Hb_089299_010 0.225703753 - - conserved hypothetical protein [Ricinus communis]
18 Hb_006449_060 0.2261383965 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
19 Hb_010532_010 0.2289299955 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X1 [Populus euphratica]
20 Hb_166210_010 0.2531579652 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_177772_010 Hb_177772_010 Hb_003159_070 Hb_003159_070 Hb_177772_010--Hb_003159_070 Hb_161728_010 Hb_161728_010 Hb_177772_010--Hb_161728_010 Hb_003057_030 Hb_003057_030 Hb_177772_010--Hb_003057_030 Hb_029510_080 Hb_029510_080 Hb_177772_010--Hb_029510_080 Hb_002809_090 Hb_002809_090 Hb_177772_010--Hb_002809_090 Hb_005207_010 Hb_005207_010 Hb_177772_010--Hb_005207_010 Hb_000649_260 Hb_000649_260 Hb_003159_070--Hb_000649_260 Hb_003159_070--Hb_005207_010 Hb_002233_050 Hb_002233_050 Hb_003159_070--Hb_002233_050 Hb_003159_070--Hb_003057_030 Hb_003159_070--Hb_029510_080 Hb_161728_010--Hb_003057_030 Hb_161728_010--Hb_029510_080 Hb_161728_010--Hb_002809_090 Hb_142051_010 Hb_142051_010 Hb_161728_010--Hb_142051_010 Hb_089299_010 Hb_089299_010 Hb_161728_010--Hb_089299_010 Hb_003057_030--Hb_029510_080 Hb_003057_030--Hb_002809_090 Hb_003057_030--Hb_142051_010 Hb_003057_030--Hb_089299_010 Hb_029510_080--Hb_002809_090 Hb_029510_080--Hb_142051_010 Hb_029510_080--Hb_089299_010 Hb_002809_090--Hb_142051_010 Hb_002809_090--Hb_089299_010 Hb_005207_010--Hb_002233_050 Hb_005207_010--Hb_000649_260 Hb_006449_060 Hb_006449_060 Hb_005207_010--Hb_006449_060 Hb_010532_010 Hb_010532_010 Hb_005207_010--Hb_010532_010 Hb_166210_010 Hb_166210_010 Hb_005207_010--Hb_166210_010 Hb_005207_010--Hb_029510_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.806065 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.013 0.672213

CAGE analysis