Hb_000649_260

Information

Type -
Description -
Location Contig649: 270078-270338
Sequence    

Annotation

kegg
ID rcu:RCOM_0597570
description hypothetical protein
nr
ID NP_001295642.1
description uncharacterized LOC105634108 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID D6BRE5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04746 PE=2 SV=1
Gene Ontology
ID GO:0005783
description PREDICTED: uncharacterized protein LOC105125293

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000649_260 0.0 - - uncharacterized LOC105634108 [Jatropha curcas]
2 Hb_006449_060 0.0892064226 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
3 Hb_010532_010 0.0914035841 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X1 [Populus euphratica]
4 Hb_003159_070 0.0932753702 - - Uncharacterized protein TCM_035723 [Theobroma cacao]
5 Hb_005207_010 0.0956497671 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2-like [Jatropha curcas]
6 Hb_002233_050 0.1078325845 - - PREDICTED: uncharacterized protein LOC104879391 [Vitis vinifera]
7 Hb_177772_010 0.1554699828 - - PREDICTED: receptor-like protein 12 isoform X2 [Vitis vinifera]
8 Hb_166210_010 0.1721016991 - - conserved hypothetical protein [Ricinus communis]
9 Hb_005622_030 0.177743926 - - transferase, putative [Ricinus communis]
10 Hb_010678_010 0.1880923057 - - PREDICTED: alpha-glucosidase-like [Jatropha curcas]
11 Hb_018746_010 0.1896023615 - - PREDICTED: uncharacterized protein LOC105629982 [Jatropha curcas]
12 Hb_036731_010 0.1898178611 - - -
13 Hb_001514_140 0.1923236293 - - -
14 Hb_003057_030 0.1934845187 - - hypothetical protein JCGZ_06668 [Jatropha curcas]
15 Hb_029510_080 0.193681008 - - -
16 Hb_161728_010 0.2116513805 - - hypothetical protein JCGZ_11176 [Jatropha curcas]
17 Hb_002809_090 0.2122534222 - - -
18 Hb_005714_120 0.2159946621 - - nucleic acid binding protein, putative [Ricinus communis]
19 Hb_000832_340 0.2224742757 - - PREDICTED: psbP-like protein 2, chloroplastic isoform X3 [Nelumbo nucifera]
20 Hb_138229_010 0.2230168598 - - hypothetical protein JCGZ_05736 [Jatropha curcas]

Gene co-expression network

sample Hb_000649_260 Hb_000649_260 Hb_006449_060 Hb_006449_060 Hb_000649_260--Hb_006449_060 Hb_010532_010 Hb_010532_010 Hb_000649_260--Hb_010532_010 Hb_003159_070 Hb_003159_070 Hb_000649_260--Hb_003159_070 Hb_005207_010 Hb_005207_010 Hb_000649_260--Hb_005207_010 Hb_002233_050 Hb_002233_050 Hb_000649_260--Hb_002233_050 Hb_177772_010 Hb_177772_010 Hb_000649_260--Hb_177772_010 Hb_006449_060--Hb_010532_010 Hb_006449_060--Hb_002233_050 Hb_018746_010 Hb_018746_010 Hb_006449_060--Hb_018746_010 Hb_006449_060--Hb_005207_010 Hb_001514_140 Hb_001514_140 Hb_006449_060--Hb_001514_140 Hb_010532_010--Hb_002233_050 Hb_010532_010--Hb_018746_010 Hb_010532_010--Hb_001514_140 Hb_010532_010--Hb_005207_010 Hb_003159_070--Hb_177772_010 Hb_003159_070--Hb_005207_010 Hb_003159_070--Hb_002233_050 Hb_003057_030 Hb_003057_030 Hb_003159_070--Hb_003057_030 Hb_029510_080 Hb_029510_080 Hb_003159_070--Hb_029510_080 Hb_005207_010--Hb_002233_050 Hb_166210_010 Hb_166210_010 Hb_005207_010--Hb_166210_010 Hb_005207_010--Hb_029510_080 Hb_002233_050--Hb_166210_010 Hb_036731_010 Hb_036731_010 Hb_002233_050--Hb_036731_010 Hb_161728_010 Hb_161728_010 Hb_177772_010--Hb_161728_010 Hb_177772_010--Hb_003057_030 Hb_177772_010--Hb_029510_080 Hb_002809_090 Hb_002809_090 Hb_177772_010--Hb_002809_090 Hb_177772_010--Hb_005207_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.700087 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.406442 0.611321

CAGE analysis