Hb_018746_010

Information

Type -
Description -
Location Contig18746: 10456-11036
Sequence    

Annotation

kegg
ID vvi:100242530
description uncharacterized LOC100242530
nr
ID XP_012067039.1
description PREDICTED: uncharacterized protein LOC105629982 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JJI1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01710 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_018746_010 0.0 - - PREDICTED: uncharacterized protein LOC105629982 [Jatropha curcas]
2 Hb_001514_140 0.0110589284 - - -
3 Hb_002762_010 0.0488022047 - - hypothetical protein POPTR_0019s12360g [Populus trichocarpa]
4 Hb_043960_010 0.0532776043 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
5 Hb_166210_010 0.0755882808 - - conserved hypothetical protein [Ricinus communis]
6 Hb_036731_010 0.0818442983 - - -
7 Hb_005714_120 0.0954065645 - - nucleic acid binding protein, putative [Ricinus communis]
8 Hb_005337_010 0.0974499778 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Vitis vinifera]
9 Hb_010532_010 0.1017344804 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X1 [Populus euphratica]
10 Hb_006449_060 0.103195313 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
11 Hb_002121_070 0.1051857108 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000362_100 0.118317591 - - -
13 Hb_007632_140 0.1403878928 - - -
14 Hb_019135_010 0.1441307493 - - -
15 Hb_002233_050 0.1446040677 - - PREDICTED: uncharacterized protein LOC104879391 [Vitis vinifera]
16 Hb_007595_040 0.1517649152 - - ribosomal protein L2 (chloroplast) [Berberis bealei]
17 Hb_052469_020 0.1537950247 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Vitis vinifera]
18 Hb_007456_030 0.1573504972 - - -
19 Hb_005207_010 0.1636605012 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2-like [Jatropha curcas]
20 Hb_002876_100 0.1666373237 - - hypothetical protein POPTR_0019s11600g [Populus trichocarpa]

Gene co-expression network

sample Hb_018746_010 Hb_018746_010 Hb_001514_140 Hb_001514_140 Hb_018746_010--Hb_001514_140 Hb_002762_010 Hb_002762_010 Hb_018746_010--Hb_002762_010 Hb_043960_010 Hb_043960_010 Hb_018746_010--Hb_043960_010 Hb_166210_010 Hb_166210_010 Hb_018746_010--Hb_166210_010 Hb_036731_010 Hb_036731_010 Hb_018746_010--Hb_036731_010 Hb_005714_120 Hb_005714_120 Hb_018746_010--Hb_005714_120 Hb_001514_140--Hb_043960_010 Hb_001514_140--Hb_002762_010 Hb_001514_140--Hb_166210_010 Hb_001514_140--Hb_036731_010 Hb_001514_140--Hb_005714_120 Hb_002762_010--Hb_043960_010 Hb_005337_010 Hb_005337_010 Hb_002762_010--Hb_005337_010 Hb_007595_040 Hb_007595_040 Hb_002762_010--Hb_007595_040 Hb_052469_020 Hb_052469_020 Hb_002762_010--Hb_052469_020 Hb_043960_010--Hb_005337_010 Hb_000362_100 Hb_000362_100 Hb_043960_010--Hb_000362_100 Hb_002121_070 Hb_002121_070 Hb_043960_010--Hb_002121_070 Hb_166210_010--Hb_036731_010 Hb_166210_010--Hb_005714_120 Hb_166210_010--Hb_002121_070 Hb_002233_050 Hb_002233_050 Hb_166210_010--Hb_002233_050 Hb_036731_010--Hb_005714_120 Hb_036731_010--Hb_002121_070 Hb_036731_010--Hb_000362_100 Hb_005714_120--Hb_002121_070 Hb_005714_120--Hb_000362_100 Hb_005021_040 Hb_005021_040 Hb_005714_120--Hb_005021_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.125629 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0589531 0.249447

CAGE analysis