Hb_142051_010

Information

Type -
Description -
Location Contig142051: 2720-3447
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_142051_010 0.0 - - -
2 Hb_002809_090 0.0628948347 - - -
3 Hb_089299_010 0.0743467545 - - conserved hypothetical protein [Ricinus communis]
4 Hb_029510_080 0.083321065 - - -
5 Hb_003057_030 0.0858930057 - - hypothetical protein JCGZ_06668 [Jatropha curcas]
6 Hb_161728_010 0.0936689966 - - hypothetical protein JCGZ_11176 [Jatropha curcas]
7 Hb_000906_120 0.1378044528 - - hypothetical protein VITISV_006406 [Vitis vinifera]
8 Hb_006415_010 0.1414145617 - - -
9 Hb_002188_050 0.1728990281 - - PREDICTED: serine carboxypeptidase-like 2 [Jatropha curcas]
10 Hb_001534_040 0.184145193 - - hypothetical protein JCGZ_08436 [Jatropha curcas]
11 Hb_177772_010 0.185215433 - - PREDICTED: receptor-like protein 12 isoform X2 [Vitis vinifera]
12 Hb_005207_010 0.1887556251 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2-like [Jatropha curcas]
13 Hb_002233_050 0.192986007 - - PREDICTED: uncharacterized protein LOC104879391 [Vitis vinifera]
14 Hb_188163_010 0.2006291431 - - hypothetical protein CISIN_1g048732mg [Citrus sinensis]
15 Hb_000230_020 0.2010656534 - - cysteine synthase, putative [Ricinus communis]
16 Hb_004487_060 0.2030243816 - - cytochrome P450, putative [Ricinus communis]
17 Hb_097933_010 0.2061320968 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like isoform X1 [Jatropha curcas]
18 Hb_005021_040 0.2078138495 - - PREDICTED: uncharacterized protein LOC103848240 [Brassica rapa]
19 Hb_060822_010 0.2083930065 - - -
20 Hb_011576_010 0.2085129575 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]

Gene co-expression network

sample Hb_142051_010 Hb_142051_010 Hb_002809_090 Hb_002809_090 Hb_142051_010--Hb_002809_090 Hb_089299_010 Hb_089299_010 Hb_142051_010--Hb_089299_010 Hb_029510_080 Hb_029510_080 Hb_142051_010--Hb_029510_080 Hb_003057_030 Hb_003057_030 Hb_142051_010--Hb_003057_030 Hb_161728_010 Hb_161728_010 Hb_142051_010--Hb_161728_010 Hb_000906_120 Hb_000906_120 Hb_142051_010--Hb_000906_120 Hb_002809_090--Hb_029510_080 Hb_002809_090--Hb_003057_030 Hb_002809_090--Hb_161728_010 Hb_002809_090--Hb_089299_010 Hb_177772_010 Hb_177772_010 Hb_002809_090--Hb_177772_010 Hb_089299_010--Hb_000906_120 Hb_006415_010 Hb_006415_010 Hb_089299_010--Hb_006415_010 Hb_002188_050 Hb_002188_050 Hb_089299_010--Hb_002188_050 Hb_089299_010--Hb_029510_080 Hb_029510_080--Hb_003057_030 Hb_029510_080--Hb_161728_010 Hb_029510_080--Hb_177772_010 Hb_003057_030--Hb_161728_010 Hb_003057_030--Hb_177772_010 Hb_003057_030--Hb_089299_010 Hb_161728_010--Hb_177772_010 Hb_161728_010--Hb_089299_010 Hb_000906_120--Hb_006415_010 Hb_000906_120--Hb_002188_050 Hb_005021_040 Hb_005021_040 Hb_000906_120--Hb_005021_040 Hb_188163_010 Hb_188163_010 Hb_000906_120--Hb_188163_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.449673 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.40583 1.21199

CAGE analysis