Hb_006415_010

Information

Type -
Description -
Location Contig6415: 5817-8897
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006415_010 0.0 - - -
2 Hb_000906_120 0.0344391409 - - hypothetical protein VITISV_006406 [Vitis vinifera]
3 Hb_002188_050 0.0364190313 - - PREDICTED: serine carboxypeptidase-like 2 [Jatropha curcas]
4 Hb_005021_040 0.0671946305 - - PREDICTED: uncharacterized protein LOC103848240 [Brassica rapa]
5 Hb_089299_010 0.0691780386 - - conserved hypothetical protein [Ricinus communis]
6 Hb_005714_120 0.1200463654 - - nucleic acid binding protein, putative [Ricinus communis]
7 Hb_002121_070 0.1302876257 - - conserved hypothetical protein [Ricinus communis]
8 Hb_036731_010 0.1310252731 - - -
9 Hb_142051_010 0.1414145617 - - -
10 Hb_166210_010 0.1418895368 - - conserved hypothetical protein [Ricinus communis]
11 Hb_188163_010 0.1421495269 - - hypothetical protein CISIN_1g048732mg [Citrus sinensis]
12 Hb_002876_100 0.1458755366 - - hypothetical protein POPTR_0019s11600g [Populus trichocarpa]
13 Hb_000362_100 0.1472382153 - - -
14 Hb_002809_090 0.1534692855 - - -
15 Hb_002233_050 0.1566076067 - - PREDICTED: uncharacterized protein LOC104879391 [Vitis vinifera]
16 Hb_007632_140 0.1608459082 - - -
17 Hb_029510_080 0.1623695261 - - -
18 Hb_003057_030 0.167770767 - - hypothetical protein JCGZ_06668 [Jatropha curcas]
19 Hb_005207_010 0.1693065349 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2-like [Jatropha curcas]
20 Hb_010129_020 0.1706513663 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_006415_010 Hb_006415_010 Hb_000906_120 Hb_000906_120 Hb_006415_010--Hb_000906_120 Hb_002188_050 Hb_002188_050 Hb_006415_010--Hb_002188_050 Hb_005021_040 Hb_005021_040 Hb_006415_010--Hb_005021_040 Hb_089299_010 Hb_089299_010 Hb_006415_010--Hb_089299_010 Hb_005714_120 Hb_005714_120 Hb_006415_010--Hb_005714_120 Hb_002121_070 Hb_002121_070 Hb_006415_010--Hb_002121_070 Hb_000906_120--Hb_002188_050 Hb_000906_120--Hb_089299_010 Hb_000906_120--Hb_005021_040 Hb_188163_010 Hb_188163_010 Hb_000906_120--Hb_188163_010 Hb_142051_010 Hb_142051_010 Hb_000906_120--Hb_142051_010 Hb_002188_050--Hb_005021_040 Hb_002188_050--Hb_089299_010 Hb_002188_050--Hb_005714_120 Hb_002188_050--Hb_002121_070 Hb_005021_040--Hb_002121_070 Hb_005021_040--Hb_005714_120 Hb_000362_100 Hb_000362_100 Hb_005021_040--Hb_000362_100 Hb_089299_010--Hb_142051_010 Hb_002809_090 Hb_002809_090 Hb_089299_010--Hb_002809_090 Hb_029510_080 Hb_029510_080 Hb_089299_010--Hb_029510_080 Hb_036731_010 Hb_036731_010 Hb_005714_120--Hb_036731_010 Hb_005714_120--Hb_002121_070 Hb_166210_010 Hb_166210_010 Hb_005714_120--Hb_166210_010 Hb_005714_120--Hb_000362_100 Hb_001514_140 Hb_001514_140 Hb_005714_120--Hb_001514_140 Hb_002121_070--Hb_000362_100 Hb_007632_140 Hb_007632_140 Hb_002121_070--Hb_007632_140 Hb_002121_070--Hb_036731_010 Hb_019135_010 Hb_019135_010 Hb_002121_070--Hb_019135_010 Hb_002121_070--Hb_166210_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.124551 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.276705 0.494003

CAGE analysis