Hb_064106_010

Information

Type -
Description -
Location Contig64106: 105-1471
Sequence    

Annotation

kegg
ID vvi:104878249
description uncharacterized LOC104878249
nr
ID XP_010646608.1
description PREDICTED: uncharacterized protein LOC104878249 [Vitis vinifera]
swissprot
ID -
description -
trembl
ID A5BJW1
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008825 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_064106_010 0.0 - - PREDICTED: uncharacterized protein LOC104878249 [Vitis vinifera]
2 Hb_003494_180 0.118597954 - - PREDICTED: vacuolar amino acid transporter 1-like [Jatropha curcas]
3 Hb_002845_020 0.1247153408 - - hypothetical protein POPTR_0012s14920g [Populus trichocarpa]
4 Hb_005436_030 0.1254657166 - - PREDICTED: UDP-glycosyltransferase 74E1-like [Jatropha curcas]
5 Hb_023547_020 0.1277478487 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001538_040 0.1598443179 - - PREDICTED: uncharacterized protein LOC104228304 [Nicotiana sylvestris]
7 Hb_016637_020 0.1653621027 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
8 Hb_007205_020 0.1658160825 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
9 Hb_001301_010 0.1676105417 - - receptor protein kinase, putative [Ricinus communis]
10 Hb_057321_010 0.1748045541 - - receptor serine/threonine kinase, putative [Ricinus communis]
11 Hb_060822_010 0.1756893464 - - -
12 Hb_000500_360 0.1769405968 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
13 Hb_000574_030 0.1780679037 desease resistance Gene Name: Glyco_hydro_38 Disease resistance protein RPS5, putative [Ricinus communis]
14 Hb_000732_180 0.1784810453 - - Uncharacterized protein TCM_030007 [Theobroma cacao]
15 Hb_000049_170 0.1816050455 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001866_100 0.1827672386 - - PREDICTED: uncharacterized protein LOC104212668 [Nicotiana sylvestris]
17 Hb_006992_030 0.1842055273 - - PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris]
18 Hb_000375_250 0.1852896385 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
19 Hb_000776_020 0.1873867843 transcription factor TF Family: M-type hypothetical protein JCGZ_25594 [Jatropha curcas]
20 Hb_000191_100 0.1892200307 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_064106_010 Hb_064106_010 Hb_003494_180 Hb_003494_180 Hb_064106_010--Hb_003494_180 Hb_002845_020 Hb_002845_020 Hb_064106_010--Hb_002845_020 Hb_005436_030 Hb_005436_030 Hb_064106_010--Hb_005436_030 Hb_023547_020 Hb_023547_020 Hb_064106_010--Hb_023547_020 Hb_001538_040 Hb_001538_040 Hb_064106_010--Hb_001538_040 Hb_016637_020 Hb_016637_020 Hb_064106_010--Hb_016637_020 Hb_003494_180--Hb_002845_020 Hb_003494_180--Hb_016637_020 Hb_007205_020 Hb_007205_020 Hb_003494_180--Hb_007205_020 Hb_001866_100 Hb_001866_100 Hb_003494_180--Hb_001866_100 Hb_057321_010 Hb_057321_010 Hb_003494_180--Hb_057321_010 Hb_001856_110 Hb_001856_110 Hb_003494_180--Hb_001856_110 Hb_002845_020--Hb_001866_100 Hb_002845_020--Hb_007205_020 Hb_000049_170 Hb_000049_170 Hb_002845_020--Hb_000049_170 Hb_001301_010 Hb_001301_010 Hb_002845_020--Hb_001301_010 Hb_002845_020--Hb_016637_020 Hb_005436_030--Hb_023547_020 Hb_005436_030--Hb_001538_040 Hb_060822_010 Hb_060822_010 Hb_005436_030--Hb_060822_010 Hb_005436_030--Hb_003494_180 Hb_006992_030 Hb_006992_030 Hb_005436_030--Hb_006992_030 Hb_023547_020--Hb_001538_040 Hb_023547_020--Hb_060822_010 Hb_023547_020--Hb_006992_030 Hb_005831_010 Hb_005831_010 Hb_023547_020--Hb_005831_010 Hb_001538_040--Hb_060822_010 Hb_000149_120 Hb_000149_120 Hb_001538_040--Hb_000149_120 Hb_024570_020 Hb_024570_020 Hb_001538_040--Hb_024570_020 Hb_040963_010 Hb_040963_010 Hb_001538_040--Hb_040963_010 Hb_127661_010 Hb_127661_010 Hb_016637_020--Hb_127661_010 Hb_000191_100 Hb_000191_100 Hb_016637_020--Hb_000191_100 Hb_016637_020--Hb_007205_020 Hb_170878_050 Hb_170878_050 Hb_016637_020--Hb_170878_050 Hb_029866_110 Hb_029866_110 Hb_016637_020--Hb_029866_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.185791 0.287678 0.0315274 0 0.0172026
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.451594 0.579571

CAGE analysis