Hb_057321_010

Information

Type -
Description -
Location Contig57321: 184-2389
Sequence    

Annotation

kegg
ID rcu:RCOM_0574930
description receptor serine/threonine kinase, putative
nr
ID XP_002529765.1
description receptor serine/threonine kinase, putative [Ricinus communis]
swissprot
ID P0CH02
description Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana GN=ATL21B PE=3 SV=1
trembl
ID B9SUU6
description Receptor serine/threonine kinase, putative OS=Ricinus communis GN=RCOM_0574930 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_057321_010 0.0 - - receptor serine/threonine kinase, putative [Ricinus communis]
2 Hb_003494_180 0.1176143082 - - PREDICTED: vacuolar amino acid transporter 1-like [Jatropha curcas]
3 Hb_000417_250 0.1297147336 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 65 [Jatropha curcas]
4 Hb_000116_330 0.1393803726 - - PREDICTED: glutamate receptor 3.6-like [Jatropha curcas]
5 Hb_001856_110 0.143211968 - - PREDICTED: cellulose synthase-like protein G2 [Populus euphratica]
6 Hb_003683_200 0.1464322476 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
7 Hb_000261_370 0.1541650317 - - -
8 Hb_002845_020 0.1583970511 - - hypothetical protein POPTR_0012s14920g [Populus trichocarpa]
9 Hb_016637_020 0.1601376692 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
10 Hb_007205_020 0.1630844585 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
11 Hb_004525_020 0.1668719884 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 6-like [Jatropha curcas]
12 Hb_000680_020 0.1681274806 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
13 Hb_127661_010 0.1684807848 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_000375_250 0.1702392421 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
15 Hb_029576_100 0.1704029585 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 31 [Jatropha curcas]
16 Hb_013786_010 0.1725395279 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_064106_010 0.1748045541 - - PREDICTED: uncharacterized protein LOC104878249 [Vitis vinifera]
18 Hb_000191_100 0.1779541267 - - cytochrome P450, putative [Ricinus communis]
19 Hb_000049_170 0.1786726822 - - conserved hypothetical protein [Ricinus communis]
20 Hb_007113_020 0.1801061032 - - -

Gene co-expression network

sample Hb_057321_010 Hb_057321_010 Hb_003494_180 Hb_003494_180 Hb_057321_010--Hb_003494_180 Hb_000417_250 Hb_000417_250 Hb_057321_010--Hb_000417_250 Hb_000116_330 Hb_000116_330 Hb_057321_010--Hb_000116_330 Hb_001856_110 Hb_001856_110 Hb_057321_010--Hb_001856_110 Hb_003683_200 Hb_003683_200 Hb_057321_010--Hb_003683_200 Hb_000261_370 Hb_000261_370 Hb_057321_010--Hb_000261_370 Hb_002845_020 Hb_002845_020 Hb_003494_180--Hb_002845_020 Hb_016637_020 Hb_016637_020 Hb_003494_180--Hb_016637_020 Hb_007205_020 Hb_007205_020 Hb_003494_180--Hb_007205_020 Hb_001866_100 Hb_001866_100 Hb_003494_180--Hb_001866_100 Hb_003494_180--Hb_001856_110 Hb_029576_100 Hb_029576_100 Hb_000417_250--Hb_029576_100 Hb_013786_010 Hb_013786_010 Hb_000417_250--Hb_013786_010 Hb_000417_250--Hb_000116_330 Hb_000417_250--Hb_000261_370 Hb_000680_020 Hb_000680_020 Hb_000417_250--Hb_000680_020 Hb_127661_010 Hb_127661_010 Hb_000417_250--Hb_127661_010 Hb_000116_330--Hb_003683_200 Hb_004525_020 Hb_004525_020 Hb_000116_330--Hb_004525_020 Hb_001160_020 Hb_001160_020 Hb_000116_330--Hb_001160_020 Hb_000116_330--Hb_000680_020 Hb_000116_330--Hb_000261_370 Hb_000009_390 Hb_000009_390 Hb_001856_110--Hb_000009_390 Hb_071130_020 Hb_071130_020 Hb_001856_110--Hb_071130_020 Hb_001856_110--Hb_003683_200 Hb_031949_010 Hb_031949_010 Hb_001856_110--Hb_031949_010 Hb_001856_110--Hb_000680_020 Hb_003683_200--Hb_000680_020 Hb_001836_010 Hb_001836_010 Hb_003683_200--Hb_001836_010 Hb_003683_200--Hb_004525_020 Hb_002849_120 Hb_002849_120 Hb_003683_200--Hb_002849_120 Hb_000261_370--Hb_127661_010 Hb_007113_020 Hb_007113_020 Hb_000261_370--Hb_007113_020 Hb_000261_370--Hb_029576_100 Hb_005496_170 Hb_005496_170 Hb_000261_370--Hb_005496_170 Hb_001634_080 Hb_001634_080 Hb_000261_370--Hb_001634_080 Hb_000261_370--Hb_016637_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0220789 1.11938 1.16287 0.114637 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0404494 0 0.0591981 1.18533 1.77818

CAGE analysis