Hb_005436_030

Information

Type -
Description -
Location Contig5436: 87037-100131
Sequence    

Annotation

kegg
ID pop:POPTR_0007s00890g
description POPTRDRAFT_562134; putative glucosyltransferase family protein
nr
ID XP_012075380.1
description PREDICTED: UDP-glycosyltransferase 74E1-like [Jatropha curcas]
swissprot
ID P0C7P7
description UDP-glycosyltransferase 74E1 OS=Arabidopsis thaliana GN=UGT74E1 PE=3 SV=1
trembl
ID F6HAY4
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g01030 PE=3 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 74e2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47901: 87805-88621
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005436_030 0.0 - - PREDICTED: UDP-glycosyltransferase 74E1-like [Jatropha curcas]
2 Hb_023547_020 0.0859751732 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001538_040 0.0887796467 - - PREDICTED: uncharacterized protein LOC104228304 [Nicotiana sylvestris]
4 Hb_060822_010 0.1002397451 - - -
5 Hb_064106_010 0.1254657166 - - PREDICTED: uncharacterized protein LOC104878249 [Vitis vinifera]
6 Hb_003494_180 0.1596748017 - - PREDICTED: vacuolar amino acid transporter 1-like [Jatropha curcas]
7 Hb_006992_030 0.1725487259 - - PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris]
8 Hb_005831_010 0.1763131405 - - hypothetical protein JCGZ_04003 [Jatropha curcas]
9 Hb_001534_040 0.1807986053 - - hypothetical protein JCGZ_08436 [Jatropha curcas]
10 Hb_000149_120 0.1828399158 - - PREDICTED: uncharacterized protein LOC105642119 isoform X2 [Jatropha curcas]
11 Hb_000375_250 0.1872563694 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
12 Hb_002845_020 0.1884596936 - - hypothetical protein POPTR_0012s14920g [Populus trichocarpa]
13 Hb_007382_070 0.1917115856 - - PREDICTED: MAPK-interacting and spindle-stabilizing protein-like [Jatropha curcas]
14 Hb_006916_180 0.192084568 - - Mitochondrial carnitine/acylcarnitine carrier protein, putative [Ricinus communis]
15 Hb_057321_010 0.1962879504 - - receptor serine/threonine kinase, putative [Ricinus communis]
16 Hb_040963_010 0.1964817064 - - PREDICTED: polyneuridine-aldehyde esterase-like [Populus euphratica]
17 Hb_000465_180 0.2046815842 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
18 Hb_005765_020 0.2051128613 - - -
19 Hb_024570_020 0.2070974338 transcription factor TF Family: MYB-related PREDICTED: transcription factor RAX2-like [Populus euphratica]
20 Hb_170878_070 0.2112478618 - - hypothetical protein EUGRSUZ_L008133, partial [Eucalyptus grandis]

Gene co-expression network

sample Hb_005436_030 Hb_005436_030 Hb_023547_020 Hb_023547_020 Hb_005436_030--Hb_023547_020 Hb_001538_040 Hb_001538_040 Hb_005436_030--Hb_001538_040 Hb_060822_010 Hb_060822_010 Hb_005436_030--Hb_060822_010 Hb_064106_010 Hb_064106_010 Hb_005436_030--Hb_064106_010 Hb_003494_180 Hb_003494_180 Hb_005436_030--Hb_003494_180 Hb_006992_030 Hb_006992_030 Hb_005436_030--Hb_006992_030 Hb_023547_020--Hb_001538_040 Hb_023547_020--Hb_060822_010 Hb_023547_020--Hb_064106_010 Hb_023547_020--Hb_006992_030 Hb_005831_010 Hb_005831_010 Hb_023547_020--Hb_005831_010 Hb_001538_040--Hb_060822_010 Hb_000149_120 Hb_000149_120 Hb_001538_040--Hb_000149_120 Hb_024570_020 Hb_024570_020 Hb_001538_040--Hb_024570_020 Hb_040963_010 Hb_040963_010 Hb_001538_040--Hb_040963_010 Hb_060822_010--Hb_024570_020 Hb_060822_010--Hb_000149_120 Hb_001534_040 Hb_001534_040 Hb_060822_010--Hb_001534_040 Hb_064106_010--Hb_003494_180 Hb_002845_020 Hb_002845_020 Hb_064106_010--Hb_002845_020 Hb_064106_010--Hb_001538_040 Hb_016637_020 Hb_016637_020 Hb_064106_010--Hb_016637_020 Hb_003494_180--Hb_002845_020 Hb_003494_180--Hb_016637_020 Hb_007205_020 Hb_007205_020 Hb_003494_180--Hb_007205_020 Hb_001866_100 Hb_001866_100 Hb_003494_180--Hb_001866_100 Hb_057321_010 Hb_057321_010 Hb_003494_180--Hb_057321_010 Hb_001856_110 Hb_001856_110 Hb_003494_180--Hb_001856_110 Hb_001355_050 Hb_001355_050 Hb_006992_030--Hb_001355_050 Hb_003927_020 Hb_003927_020 Hb_006992_030--Hb_003927_020 Hb_005765_020 Hb_005765_020 Hb_006992_030--Hb_005765_020 Hb_005595_030 Hb_005595_030 Hb_006992_030--Hb_005595_030 Hb_001880_020 Hb_001880_020 Hb_006992_030--Hb_001880_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.86712 1.36408 0.026354 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0163941 0.0258012 0 2.72916 2.69138

CAGE analysis