Hb_027136_020

Information

Type -
Description -
Location Contig27136: 1445-3724
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027136_020 0.0 - - -
2 Hb_012753_180 0.2150577711 - - PREDICTED: cytochrome P450 87A3 [Jatropha curcas]
3 Hb_000181_370 0.2381889141 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002582_080 0.2545883931 - - -
5 Hb_001329_020 0.257812981 - - PREDICTED: probable boron transporter 2 [Populus euphratica]
6 Hb_000358_130 0.2746918197 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
7 Hb_003536_090 0.2764060833 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
8 Hb_052802_010 0.2902935777 - - kinase, putative [Ricinus communis]
9 Hb_001277_060 0.290566452 - - ADP-ribosylation factor-like protein 5 [Morus notabilis]
10 Hb_000320_250 0.2944949698 - - hypothetical protein POPTR_0021s00440g [Populus trichocarpa]
11 Hb_000367_110 0.2964787949 - - PREDICTED: monodehydroascorbate reductase, chloroplastic isoform X1 [Sesamum indicum]
12 Hb_001405_240 0.3024636791 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000984_040 0.3028756094 - - multidrug resistance pump, putative [Ricinus communis]
14 Hb_003906_040 0.3039895164 transcription factor TF Family: M-type PREDICTED: MADS-box protein SOC1-like [Tarenaya hassleriana]
15 Hb_007889_020 0.3052145744 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001810_050 0.3061943603 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004218_100 0.3080994375 - - PREDICTED: DNA-directed RNA polymerase V subunit 5C [Jatropha curcas]
18 Hb_116360_010 0.3082072659 - - -
19 Hb_001248_120 0.3082669556 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003226_130 0.3110259889 - - PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Jatropha curcas]

Gene co-expression network

sample Hb_027136_020 Hb_027136_020 Hb_012753_180 Hb_012753_180 Hb_027136_020--Hb_012753_180 Hb_000181_370 Hb_000181_370 Hb_027136_020--Hb_000181_370 Hb_002582_080 Hb_002582_080 Hb_027136_020--Hb_002582_080 Hb_001329_020 Hb_001329_020 Hb_027136_020--Hb_001329_020 Hb_000358_130 Hb_000358_130 Hb_027136_020--Hb_000358_130 Hb_003536_090 Hb_003536_090 Hb_027136_020--Hb_003536_090 Hb_012753_180--Hb_001329_020 Hb_003226_130 Hb_003226_130 Hb_012753_180--Hb_003226_130 Hb_021596_060 Hb_021596_060 Hb_012753_180--Hb_021596_060 Hb_005227_050 Hb_005227_050 Hb_012753_180--Hb_005227_050 Hb_000676_280 Hb_000676_280 Hb_012753_180--Hb_000676_280 Hb_001405_240 Hb_001405_240 Hb_000181_370--Hb_001405_240 Hb_000984_040 Hb_000984_040 Hb_000181_370--Hb_000984_040 Hb_000032_160 Hb_000032_160 Hb_000181_370--Hb_000032_160 Hb_177587_010 Hb_177587_010 Hb_000181_370--Hb_177587_010 Hb_000334_040 Hb_000334_040 Hb_000181_370--Hb_000334_040 Hb_000302_110 Hb_000302_110 Hb_002582_080--Hb_000302_110 Hb_004925_030 Hb_004925_030 Hb_002582_080--Hb_004925_030 Hb_000302_100 Hb_000302_100 Hb_002582_080--Hb_000302_100 Hb_011918_010 Hb_011918_010 Hb_002582_080--Hb_011918_010 Hb_034299_070 Hb_034299_070 Hb_002582_080--Hb_034299_070 Hb_002582_080--Hb_001329_020 Hb_001329_020--Hb_000302_100 Hb_002122_060 Hb_002122_060 Hb_001329_020--Hb_002122_060 Hb_004117_330 Hb_004117_330 Hb_001329_020--Hb_004117_330 Hb_001329_020--Hb_003536_090 Hb_000707_040 Hb_000707_040 Hb_001329_020--Hb_000707_040 Hb_001396_080 Hb_001396_080 Hb_000358_130--Hb_001396_080 Hb_000358_130--Hb_003226_130 Hb_005356_050 Hb_005356_050 Hb_000358_130--Hb_005356_050 Hb_009010_040 Hb_009010_040 Hb_000358_130--Hb_009010_040 Hb_000723_210 Hb_000723_210 Hb_000358_130--Hb_000723_210 Hb_000352_240 Hb_000352_240 Hb_000358_130--Hb_000352_240 Hb_002164_010 Hb_002164_010 Hb_003536_090--Hb_002164_010 Hb_000236_210 Hb_000236_210 Hb_003536_090--Hb_000236_210 Hb_017434_080 Hb_017434_080 Hb_003536_090--Hb_017434_080 Hb_020831_060 Hb_020831_060 Hb_003536_090--Hb_020831_060 Hb_001269_100 Hb_001269_100 Hb_003536_090--Hb_001269_100 Hb_003536_090--Hb_000302_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.614081 0.636683 0 6.0215 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.730133 0.287496 0 0.266499 0

CAGE analysis