Hb_021596_060

Information

Type -
Description -
Location Contig21596: 35200-44900
Sequence    

Annotation

kegg
ID sot:102586957
description peroxidase 56-like
nr
ID XP_006352037.1
description PREDICTED: peroxidase 56-like, partial [Solanum tuberosum]
swissprot
ID Q9ZV04
description Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1
trembl
ID A0A067L7G4
description Peroxidase OS=Jatropha curcas GN=JCGZ_02037 PE=3 SV=1
Gene Ontology
ID GO:0004601
description peroxidase 24-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_021596_060 0.0 - - PREDICTED: peroxidase 56-like, partial [Solanum tuberosum]
2 Hb_005306_090 0.160033708 - - -
3 Hb_000676_280 0.2232385343 - - ATP binding protein, putative [Ricinus communis]
4 Hb_012753_180 0.2400038365 - - PREDICTED: cytochrome P450 87A3 [Jatropha curcas]
5 Hb_000707_040 0.2567116878 - - Uncharacterized protein TCM_021829 [Theobroma cacao]
6 Hb_001329_020 0.2625863381 - - PREDICTED: probable boron transporter 2 [Populus euphratica]
7 Hb_004453_190 0.2660685971 - - -
8 Hb_005001_010 0.2667254074 - - GAST1 protein precursor, putative [Ricinus communis]
9 Hb_000352_240 0.2716513939 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
10 Hb_000413_080 0.274859248 - - -
11 Hb_000302_100 0.2758109579 - - PREDICTED: uncharacterized protein LOC105766209 [Gossypium raimondii]
12 Hb_003226_130 0.279037127 - - PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Jatropha curcas]
13 Hb_023768_020 0.2810471303 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001404_030 0.283146883 - - DWNN domain isoform 3 [Theobroma cacao]
15 Hb_009851_040 0.2896510376 - - conserved hypothetical protein [Ricinus communis]
16 Hb_105660_010 0.290004881 - - PREDICTED: potassium channel AKT6-like [Jatropha curcas]
17 Hb_002243_050 0.2947170831 - - PREDICTED: ion channel DMI1-like isoform X2 [Jatropha curcas]
18 Hb_004117_330 0.2956639556 - - conserved hypothetical protein [Ricinus communis]
19 Hb_005656_160 0.2957127193 - - PREDICTED: uncharacterized protein LOC105637448 [Jatropha curcas]
20 Hb_159327_010 0.2962538576 - - hypothetical protein JCGZ_23768 [Jatropha curcas]

Gene co-expression network

sample Hb_021596_060 Hb_021596_060 Hb_005306_090 Hb_005306_090 Hb_021596_060--Hb_005306_090 Hb_000676_280 Hb_000676_280 Hb_021596_060--Hb_000676_280 Hb_012753_180 Hb_012753_180 Hb_021596_060--Hb_012753_180 Hb_000707_040 Hb_000707_040 Hb_021596_060--Hb_000707_040 Hb_001329_020 Hb_001329_020 Hb_021596_060--Hb_001329_020 Hb_004453_190 Hb_004453_190 Hb_021596_060--Hb_004453_190 Hb_000302_100 Hb_000302_100 Hb_005306_090--Hb_000302_100 Hb_005306_090--Hb_001329_020 Hb_108216_030 Hb_108216_030 Hb_005306_090--Hb_108216_030 Hb_005306_090--Hb_012753_180 Hb_007075_020 Hb_007075_020 Hb_005306_090--Hb_007075_020 Hb_000676_280--Hb_012753_180 Hb_000676_280--Hb_001329_020 Hb_000236_170 Hb_000236_170 Hb_000676_280--Hb_000236_170 Hb_052802_010 Hb_052802_010 Hb_000676_280--Hb_052802_010 Hb_001804_030 Hb_001804_030 Hb_000676_280--Hb_001804_030 Hb_012753_180--Hb_001329_020 Hb_003226_130 Hb_003226_130 Hb_012753_180--Hb_003226_130 Hb_027136_020 Hb_027136_020 Hb_012753_180--Hb_027136_020 Hb_005227_050 Hb_005227_050 Hb_012753_180--Hb_005227_050 Hb_000707_040--Hb_001329_020 Hb_002164_010 Hb_002164_010 Hb_000707_040--Hb_002164_010 Hb_000816_190 Hb_000816_190 Hb_000707_040--Hb_000816_190 Hb_003536_090 Hb_003536_090 Hb_000707_040--Hb_003536_090 Hb_004117_330 Hb_004117_330 Hb_000707_040--Hb_004117_330 Hb_000089_200 Hb_000089_200 Hb_000707_040--Hb_000089_200 Hb_001329_020--Hb_000302_100 Hb_002122_060 Hb_002122_060 Hb_001329_020--Hb_002122_060 Hb_001329_020--Hb_004117_330 Hb_001329_020--Hb_003536_090 Hb_129105_010 Hb_129105_010 Hb_004453_190--Hb_129105_010 Hb_139569_010 Hb_139569_010 Hb_004453_190--Hb_139569_010 Hb_001016_020 Hb_001016_020 Hb_004453_190--Hb_001016_020 Hb_026186_010 Hb_026186_010 Hb_004453_190--Hb_026186_010 Hb_133661_010 Hb_133661_010 Hb_004453_190--Hb_133661_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.019496 0.0631843 0.020259 0.174268 0.0182451 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0347917 0 0.00920034 0

CAGE analysis