Hb_025048_020

Information

Type -
Description -
Location Contig25048: 7047-8579
Sequence    

Annotation

kegg
ID rcu:RCOM_1514860
description cytochrome P450, putative (EC:1.14.13.21)
nr
ID XP_002511566.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID O48922
description Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1
trembl
ID B9R991
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1514860 PE=3 SV=1
Gene Ontology
ID GO:0043231
description cytochrome p450 98a2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_025048_020 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_154600_010 0.2630802415 - - hypothetical protein JCGZ_17786 [Jatropha curcas]
3 Hb_063480_010 0.2744079307 - - PREDICTED: endoribonuclease Dicer homolog 1-like isoform X2 [Pyrus x bretschneideri]
4 Hb_000926_230 0.2936027799 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000029_100 0.2985899003 - - PREDICTED: nicalin-1-like isoform X2 [Populus euphratica]
6 Hb_000028_060 0.3023253979 - - -
7 Hb_001545_050 0.3084875869 - - PREDICTED: ras-related protein Rab7 [Nicotiana sylvestris]
8 Hb_005965_020 0.3103199681 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002571_040 0.3141543509 - - hypothetical protein RCOM_1321060 [Ricinus communis]
10 Hb_001488_310 0.3194788148 - - PREDICTED: phenolic glucoside malonyltransferase 1-like [Jatropha curcas]
11 Hb_011942_010 0.3213833184 - - conserved hypothetical protein [Ricinus communis]
12 Hb_133724_010 0.32466593 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001722_050 0.3254641735 - - calcium binding family protein [Populus trichocarpa]
14 Hb_000152_220 0.3255301293 - - acc synthase, putative [Ricinus communis]
15 Hb_005928_050 0.327671296 - - glutathione reductase [Hevea brasiliensis]
16 Hb_073799_010 0.3303847037 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000136_180 0.3317986832 - - ribosomal protein S28, putative [Ricinus communis]
18 Hb_164255_010 0.3362951888 - - PREDICTED: aspartate-semialdehyde dehydrogenase [Jatropha curcas]
19 Hb_000599_220 0.3371687272 - - PREDICTED: uncharacterized protein LOC105644022 [Jatropha curcas]
20 Hb_003098_010 0.3390087513 - - -

Gene co-expression network

sample Hb_025048_020 Hb_025048_020 Hb_154600_010 Hb_154600_010 Hb_025048_020--Hb_154600_010 Hb_063480_010 Hb_063480_010 Hb_025048_020--Hb_063480_010 Hb_000926_230 Hb_000926_230 Hb_025048_020--Hb_000926_230 Hb_000029_100 Hb_000029_100 Hb_025048_020--Hb_000029_100 Hb_000028_060 Hb_000028_060 Hb_025048_020--Hb_000028_060 Hb_001545_050 Hb_001545_050 Hb_025048_020--Hb_001545_050 Hb_000116_200 Hb_000116_200 Hb_154600_010--Hb_000116_200 Hb_005965_020 Hb_005965_020 Hb_154600_010--Hb_005965_020 Hb_003376_370 Hb_003376_370 Hb_154600_010--Hb_003376_370 Hb_000031_330 Hb_000031_330 Hb_154600_010--Hb_000031_330 Hb_004774_030 Hb_004774_030 Hb_154600_010--Hb_004774_030 Hb_143800_010 Hb_143800_010 Hb_063480_010--Hb_143800_010 Hb_151939_010 Hb_151939_010 Hb_063480_010--Hb_151939_010 Hb_094437_010 Hb_094437_010 Hb_063480_010--Hb_094437_010 Hb_000136_180 Hb_000136_180 Hb_063480_010--Hb_000136_180 Hb_000415_070 Hb_000415_070 Hb_063480_010--Hb_000415_070 Hb_000139_490 Hb_000139_490 Hb_000926_230--Hb_000139_490 Hb_009620_090 Hb_009620_090 Hb_000926_230--Hb_009620_090 Hb_001005_160 Hb_001005_160 Hb_000926_230--Hb_001005_160 Hb_089140_120 Hb_089140_120 Hb_000926_230--Hb_089140_120 Hb_000926_230--Hb_001545_050 Hb_074836_010 Hb_074836_010 Hb_000926_230--Hb_074836_010 Hb_000029_090 Hb_000029_090 Hb_000029_100--Hb_000029_090 Hb_000029_100--Hb_000926_230 Hb_006769_010 Hb_006769_010 Hb_000029_100--Hb_006769_010 Hb_133724_010 Hb_133724_010 Hb_000029_100--Hb_133724_010 Hb_099878_050 Hb_099878_050 Hb_000029_100--Hb_099878_050 Hb_005686_120 Hb_005686_120 Hb_000029_100--Hb_005686_120 Hb_000028_060--Hb_001545_050 Hb_001902_130 Hb_001902_130 Hb_000028_060--Hb_001902_130 Hb_007123_060 Hb_007123_060 Hb_000028_060--Hb_007123_060 Hb_003925_070 Hb_003925_070 Hb_000028_060--Hb_003925_070 Hb_022181_030 Hb_022181_030 Hb_000028_060--Hb_022181_030 Hb_002232_040 Hb_002232_040 Hb_000028_060--Hb_002232_040 Hb_001545_050--Hb_007123_060 Hb_001545_050--Hb_003925_070 Hb_153258_050 Hb_153258_050 Hb_001545_050--Hb_153258_050 Hb_001545_050--Hb_001902_130 Hb_004883_050 Hb_004883_050 Hb_001545_050--Hb_004883_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0166219 0.0133064 0.0209904 0.0407994 0 0.0266983
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0479242 0 0.00956189 0

CAGE analysis