Hb_154600_010

Information

Type -
Description -
Location Contig154600: 1873-2813
Sequence    

Annotation

kegg
ID rcu:RCOM_0024480
description Disease resistance protein RPM1, putative
nr
ID KDP26628.1
description hypothetical protein JCGZ_17786 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JUW8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17786 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_154600_010 0.0 - - hypothetical protein JCGZ_17786 [Jatropha curcas]
2 Hb_000116_200 0.2183501796 transcription factor TF Family: HMG hypothetical protein POPTR_0005s10440g [Populus trichocarpa]
3 Hb_005965_020 0.2189636738 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003376_370 0.2328046088 - - protein binding protein, putative [Ricinus communis]
5 Hb_000031_330 0.2600728894 transcription factor TF Family: Orphans hypothetical protein POPTR_0157s00200g, partial [Populus trichocarpa]
6 Hb_025048_020 0.2630802415 - - cytochrome P450, putative [Ricinus communis]
7 Hb_004774_030 0.2704290794 - - PREDICTED: uncharacterized protein LOC105648177 [Jatropha curcas]
8 Hb_005144_170 0.2712397995 - - PREDICTED: shugoshin-1-like isoform X2 [Jatropha curcas]
9 Hb_000934_150 0.2731115277 - - hypothetical protein POPTR_0005s21000g [Populus trichocarpa]
10 Hb_000302_350 0.2743329526 - - polygalacturonase, putative [Ricinus communis]
11 Hb_004242_210 0.2749254571 - - PREDICTED: uncharacterized protein LOC105633248 [Jatropha curcas]
12 Hb_002602_030 0.275498494 - - PREDICTED: chaperone protein dnaJ 11, chloroplastic [Jatropha curcas]
13 Hb_000139_490 0.2771486431 - - PREDICTED: transcription factor MUTE [Jatropha curcas]
14 Hb_000926_230 0.2784620253 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001143_230 0.2799684922 - - beta-galactosidase family protein [Populus trichocarpa]
16 Hb_128473_010 0.2836986339 - - -
17 Hb_073799_010 0.2846745173 - - conserved hypothetical protein [Ricinus communis]
18 Hb_053345_010 0.2900766853 - - -
19 Hb_157022_030 0.298270203 transcription factor TF Family: NF-YB ccaat-binding transcription factor subunit A, putative [Ricinus communis]
20 Hb_001080_050 0.2996736073 - - PREDICTED: uncharacterized protein LOC105635235 [Jatropha curcas]

Gene co-expression network

sample Hb_154600_010 Hb_154600_010 Hb_000116_200 Hb_000116_200 Hb_154600_010--Hb_000116_200 Hb_005965_020 Hb_005965_020 Hb_154600_010--Hb_005965_020 Hb_003376_370 Hb_003376_370 Hb_154600_010--Hb_003376_370 Hb_000031_330 Hb_000031_330 Hb_154600_010--Hb_000031_330 Hb_025048_020 Hb_025048_020 Hb_154600_010--Hb_025048_020 Hb_004774_030 Hb_004774_030 Hb_154600_010--Hb_004774_030 Hb_001195_210 Hb_001195_210 Hb_000116_200--Hb_001195_210 Hb_000116_200--Hb_003376_370 Hb_001754_160 Hb_001754_160 Hb_000116_200--Hb_001754_160 Hb_000116_200--Hb_000031_330 Hb_003643_030 Hb_003643_030 Hb_000116_200--Hb_003643_030 Hb_011099_010 Hb_011099_010 Hb_005965_020--Hb_011099_010 Hb_002571_040 Hb_002571_040 Hb_005965_020--Hb_002571_040 Hb_005965_020--Hb_000031_330 Hb_001269_250 Hb_001269_250 Hb_005965_020--Hb_001269_250 Hb_002602_030 Hb_002602_030 Hb_005965_020--Hb_002602_030 Hb_001205_290 Hb_001205_290 Hb_003376_370--Hb_001205_290 Hb_000270_050 Hb_000270_050 Hb_003376_370--Hb_000270_050 Hb_005916_040 Hb_005916_040 Hb_003376_370--Hb_005916_040 Hb_012016_050 Hb_012016_050 Hb_003376_370--Hb_012016_050 Hb_007617_040 Hb_007617_040 Hb_003376_370--Hb_007617_040 Hb_004884_170 Hb_004884_170 Hb_003376_370--Hb_004884_170 Hb_007382_090 Hb_007382_090 Hb_000031_330--Hb_007382_090 Hb_000031_330--Hb_001195_210 Hb_000953_080 Hb_000953_080 Hb_000031_330--Hb_000953_080 Hb_005217_070 Hb_005217_070 Hb_000031_330--Hb_005217_070 Hb_003740_030 Hb_003740_030 Hb_000031_330--Hb_003740_030 Hb_063480_010 Hb_063480_010 Hb_025048_020--Hb_063480_010 Hb_000926_230 Hb_000926_230 Hb_025048_020--Hb_000926_230 Hb_000029_100 Hb_000029_100 Hb_025048_020--Hb_000029_100 Hb_000028_060 Hb_000028_060 Hb_025048_020--Hb_000028_060 Hb_001545_050 Hb_001545_050 Hb_025048_020--Hb_001545_050 Hb_000960_090 Hb_000960_090 Hb_004774_030--Hb_000960_090 Hb_003813_060 Hb_003813_060 Hb_004774_030--Hb_003813_060 Hb_001080_050 Hb_001080_050 Hb_004774_030--Hb_001080_050 Hb_001902_200 Hb_001902_200 Hb_004774_030--Hb_001902_200 Hb_000566_130 Hb_000566_130 Hb_004774_030--Hb_000566_130 Hb_000668_060 Hb_000668_060 Hb_004774_030--Hb_000668_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0483968 0.0412108 0.261301 0.466425 0 0.077771
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.177132 0 0.109476 0

CAGE analysis