Hb_094437_010

Information

Type -
Description -
Location Contig94437: 2662-3896
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094437_010 0.0 - - -
2 Hb_172572_010 0.1794104849 - - PREDICTED: ubiquitin thioesterase otubain-like [Jatropha curcas]
3 Hb_001032_030 0.2718951087 - - PREDICTED: 60S ribosomal protein L23a-like [Eucalyptus grandis]
4 Hb_011781_040 0.2838882655 - - -
5 Hb_001278_080 0.2840238351 transcription factor TF Family: AUX/IAA hypothetical protein JCGZ_09311 [Jatropha curcas]
6 Hb_010534_050 0.2952824732 - - PREDICTED: 40S ribosomal protein S7 [Jatropha curcas]
7 Hb_154381_010 0.3038683507 - - -
8 Hb_003551_040 0.3044188396 - - PREDICTED: uncharacterized protein LOC103331076 [Prunus mume]
9 Hb_063480_010 0.3045460457 - - PREDICTED: endoribonuclease Dicer homolog 1-like isoform X2 [Pyrus x bretschneideri]
10 Hb_041025_010 0.3078474276 - - PREDICTED: uncharacterized protein LOC105635593 [Jatropha curcas]
11 Hb_017895_010 0.3098766644 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Prunus mume]
12 Hb_000915_150 0.312977736 - - -
13 Hb_000053_050 0.3157392719 - - hypothetical protein F775_01878 [Aegilops tauschii]
14 Hb_000139_120 0.3185175911 - - sugar transporter, putative [Ricinus communis]
15 Hb_012539_090 0.3209169773 - - PREDICTED: LOW QUALITY PROTEIN: U-box domain-containing protein 26, partial [Eucalyptus grandis]
16 Hb_000907_040 0.3211382248 - - ankyrin repeat-containing protein, putative [Ricinus communis]
17 Hb_000792_080 0.3237209251 - - hypothetical protein B456_012G111300, partial [Gossypium raimondii]
18 Hb_143800_010 0.324719869 - - hypothetical protein POPTR_0010s21410g, partial [Populus trichocarpa]
19 Hb_106596_010 0.3273650827 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000505_070 0.3286841967 - - PREDICTED: heparanase-like protein 3 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_094437_010 Hb_094437_010 Hb_172572_010 Hb_172572_010 Hb_094437_010--Hb_172572_010 Hb_001032_030 Hb_001032_030 Hb_094437_010--Hb_001032_030 Hb_011781_040 Hb_011781_040 Hb_094437_010--Hb_011781_040 Hb_001278_080 Hb_001278_080 Hb_094437_010--Hb_001278_080 Hb_010534_050 Hb_010534_050 Hb_094437_010--Hb_010534_050 Hb_154381_010 Hb_154381_010 Hb_094437_010--Hb_154381_010 Hb_036026_010 Hb_036026_010 Hb_172572_010--Hb_036026_010 Hb_000915_150 Hb_000915_150 Hb_172572_010--Hb_000915_150 Hb_172572_010--Hb_154381_010 Hb_003551_040 Hb_003551_040 Hb_172572_010--Hb_003551_040 Hb_172572_010--Hb_010534_050 Hb_017895_010 Hb_017895_010 Hb_001032_030--Hb_017895_010 Hb_115045_010 Hb_115045_010 Hb_001032_030--Hb_115045_010 Hb_001032_030--Hb_011781_040 Hb_000907_040 Hb_000907_040 Hb_001032_030--Hb_000907_040 Hb_002540_040 Hb_002540_040 Hb_001032_030--Hb_002540_040 Hb_000792_080 Hb_000792_080 Hb_011781_040--Hb_000792_080 Hb_023051_010 Hb_023051_010 Hb_011781_040--Hb_023051_010 Hb_063716_060 Hb_063716_060 Hb_011781_040--Hb_063716_060 Hb_011781_040--Hb_115045_010 Hb_002023_040 Hb_002023_040 Hb_001278_080--Hb_002023_040 Hb_001278_080--Hb_017895_010 Hb_021068_030 Hb_021068_030 Hb_001278_080--Hb_021068_030 Hb_000053_050 Hb_000053_050 Hb_001278_080--Hb_000053_050 Hb_002368_090 Hb_002368_090 Hb_001278_080--Hb_002368_090 Hb_002204_040 Hb_002204_040 Hb_001278_080--Hb_002204_040 Hb_001050_060 Hb_001050_060 Hb_010534_050--Hb_001050_060 Hb_001711_050 Hb_001711_050 Hb_010534_050--Hb_001711_050 Hb_000928_050 Hb_000928_050 Hb_010534_050--Hb_000928_050 Hb_071869_010 Hb_071869_010 Hb_010534_050--Hb_071869_010 Hb_141296_010 Hb_141296_010 Hb_010534_050--Hb_141296_010 Hb_000206_190 Hb_000206_190 Hb_010534_050--Hb_000206_190 Hb_154381_010--Hb_003551_040 Hb_002311_460 Hb_002311_460 Hb_154381_010--Hb_002311_460 Hb_001832_220 Hb_001832_220 Hb_154381_010--Hb_001832_220 Hb_030885_020 Hb_030885_020 Hb_154381_010--Hb_030885_020 Hb_012539_090 Hb_012539_090 Hb_154381_010--Hb_012539_090 Hb_000737_020 Hb_000737_020 Hb_154381_010--Hb_000737_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.113082 0 0.280837 0.291127 0 0.490771
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0944803 0

CAGE analysis