Hb_002368_090

Information

Type -
Description -
Location Contig2368: 143167-144215
Sequence    

Annotation

kegg
ID pop:POPTR_0016s14030g
description POPTRDRAFT_825400; hypothetical protein
nr
ID XP_011003587.1
description PREDICTED: cationic peroxidase 1-like [Populus euphratica]
swissprot
ID P22195
description Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2
trembl
ID B9IGP7
description Peroxidase OS=Populus trichocarpa GN=PRX83 PE=2 SV=1
Gene Ontology
ID GO:0004601
description cationic peroxidase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002368_090 0.0 - - PREDICTED: cationic peroxidase 1-like [Populus euphratica]
2 Hb_000053_050 0.2116684709 - - hypothetical protein F775_01878 [Aegilops tauschii]
3 Hb_001278_080 0.2328306791 transcription factor TF Family: AUX/IAA hypothetical protein JCGZ_09311 [Jatropha curcas]
4 Hb_032258_020 0.2464791154 - - PREDICTED: amidase 1-like isoform X2 [Malus domestica]
5 Hb_030885_020 0.2551335734 - - -
6 Hb_047691_010 0.2622187511 - - Uncharacterized protein F383_01974 [Gossypium arboreum]
7 Hb_002126_020 0.2637915264 - - ferrochelatase [Medicago truncatula]
8 Hb_094437_040 0.2753229094 - - ankyrin repeat family protein, partial [Manihot esculenta]
9 Hb_003642_020 0.2802040119 - - chlorophyll(ide) b reductase, partial [Pyrus x bretschneideri]
10 Hb_046120_010 0.2823897339 - - -
11 Hb_000953_120 0.2834498122 - - -
12 Hb_000034_090 0.2839126174 transcription factor TF Family: M-type MPF2-like, partial [Dunalia fasciculata]
13 Hb_007527_070 0.2890020787 - - PREDICTED: uncharacterized protein LOC105637197 [Jatropha curcas]
14 Hb_005318_010 0.2905724549 - - hypothetical protein POPTR_0012s15190g, partial [Populus trichocarpa]
15 Hb_060458_010 0.2908936277 - - conserved hypothetical protein [Ricinus communis]
16 Hb_041025_010 0.2911853487 - - PREDICTED: uncharacterized protein LOC105635593 [Jatropha curcas]
17 Hb_021943_070 0.2924646424 - - -
18 Hb_002079_020 0.2936288396 - - -
19 Hb_001089_080 0.2945791413 - - hypothetical protein glysoja_044047 [Glycine soja]
20 Hb_000085_130 0.2952642649 - - -

Gene co-expression network

sample Hb_002368_090 Hb_002368_090 Hb_000053_050 Hb_000053_050 Hb_002368_090--Hb_000053_050 Hb_001278_080 Hb_001278_080 Hb_002368_090--Hb_001278_080 Hb_032258_020 Hb_032258_020 Hb_002368_090--Hb_032258_020 Hb_030885_020 Hb_030885_020 Hb_002368_090--Hb_030885_020 Hb_047691_010 Hb_047691_010 Hb_002368_090--Hb_047691_010 Hb_002126_020 Hb_002126_020 Hb_002368_090--Hb_002126_020 Hb_000053_050--Hb_001278_080 Hb_046120_010 Hb_046120_010 Hb_000053_050--Hb_046120_010 Hb_002023_040 Hb_002023_040 Hb_000053_050--Hb_002023_040 Hb_000082_020 Hb_000082_020 Hb_000053_050--Hb_000082_020 Hb_041025_010 Hb_041025_010 Hb_000053_050--Hb_041025_010 Hb_001278_080--Hb_002023_040 Hb_017895_010 Hb_017895_010 Hb_001278_080--Hb_017895_010 Hb_021068_030 Hb_021068_030 Hb_001278_080--Hb_021068_030 Hb_002204_040 Hb_002204_040 Hb_001278_080--Hb_002204_040 Hb_002815_050 Hb_002815_050 Hb_032258_020--Hb_002815_050 Hb_000181_150 Hb_000181_150 Hb_032258_020--Hb_000181_150 Hb_022891_010 Hb_022891_010 Hb_032258_020--Hb_022891_010 Hb_003030_040 Hb_003030_040 Hb_032258_020--Hb_003030_040 Hb_007188_030 Hb_007188_030 Hb_032258_020--Hb_007188_030 Hb_177103_010 Hb_177103_010 Hb_032258_020--Hb_177103_010 Hb_154381_010 Hb_154381_010 Hb_030885_020--Hb_154381_010 Hb_003551_040 Hb_003551_040 Hb_030885_020--Hb_003551_040 Hb_004770_060 Hb_004770_060 Hb_030885_020--Hb_004770_060 Hb_005597_010 Hb_005597_010 Hb_030885_020--Hb_005597_010 Hb_060585_010 Hb_060585_010 Hb_030885_020--Hb_060585_010 Hb_020532_010 Hb_020532_010 Hb_030885_020--Hb_020532_010 Hb_001059_140 Hb_001059_140 Hb_047691_010--Hb_001059_140 Hb_121694_010 Hb_121694_010 Hb_047691_010--Hb_121694_010 Hb_041601_010 Hb_041601_010 Hb_047691_010--Hb_041601_010 Hb_017014_020 Hb_017014_020 Hb_047691_010--Hb_017014_020 Hb_009083_030 Hb_009083_030 Hb_047691_010--Hb_009083_030 Hb_007527_070 Hb_007527_070 Hb_047691_010--Hb_007527_070 Hb_060458_010 Hb_060458_010 Hb_002126_020--Hb_060458_010 Hb_003025_060 Hb_003025_060 Hb_002126_020--Hb_003025_060 Hb_106873_020 Hb_106873_020 Hb_002126_020--Hb_106873_020 Hb_005723_070 Hb_005723_070 Hb_002126_020--Hb_005723_070 Hb_000876_010 Hb_000876_010 Hb_002126_020--Hb_000876_010 Hb_000193_030 Hb_000193_030 Hb_002126_020--Hb_000193_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.16498 4.80076 0 5.11092
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.380236 0 0.710163 0.552985

CAGE analysis