Hb_012833_020

Information

Type -
Description -
Location Contig12833: 14898-15848
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012833_020 0.0 - - -
2 Hb_000001_100 0.2317020543 - - -
3 Hb_000566_150 0.2595169558 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002173_050 0.2648225193 - - UDP-glucosyltransferase, putative [Ricinus communis]
5 Hb_017358_080 0.2841109042 - - -
6 Hb_000245_120 0.2933560732 - - hypothetical protein POPTR_0001s18890g [Populus trichocarpa]
7 Hb_001366_110 0.2946752703 - - conserved hypothetical protein [Ricinus communis]
8 Hb_147745_010 0.3040628786 - - PREDICTED: uncharacterized protein LOC105639149 [Jatropha curcas]
9 Hb_143748_010 0.3053590187 - - PREDICTED: uncharacterized protein LOC105648045 isoform X1 [Jatropha curcas]
10 Hb_003073_090 0.3063673539 transcription factor TF Family: B3 hypothetical protein POPTR_0004s23920g [Populus trichocarpa]
11 Hb_143373_010 0.3106614274 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 [Gossypium raimondii]
12 Hb_000107_020 0.3108448689 - - PREDICTED: uncharacterized protein LOC105032542 [Elaeis guineensis]
13 Hb_007674_020 0.3112257522 - - PREDICTED: serpin-ZX-like [Jatropha curcas]
14 Hb_000272_080 0.3114050653 - - temperature-induced lipocalin [Populus tremula x Populus tremuloides]
15 Hb_002105_060 0.3115005842 - - hypothetical protein POPTR_0022s00320g [Populus trichocarpa]
16 Hb_000226_120 0.3117534522 - - PREDICTED: heparanase-like protein 3 isoform X1 [Jatropha curcas]
17 Hb_000137_120 0.3121679085 - - hypothetical protein JCGZ_15021 [Jatropha curcas]
18 Hb_078038_010 0.3121937051 - - hypothetical protein CISIN_1g038197mg [Citrus sinensis]
19 Hb_002311_420 0.312909224 - - hypothetical protein JCGZ_18919 [Jatropha curcas]
20 Hb_118034_010 0.3130487938 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]

Gene co-expression network

sample Hb_012833_020 Hb_012833_020 Hb_000001_100 Hb_000001_100 Hb_012833_020--Hb_000001_100 Hb_000566_150 Hb_000566_150 Hb_012833_020--Hb_000566_150 Hb_002173_050 Hb_002173_050 Hb_012833_020--Hb_002173_050 Hb_017358_080 Hb_017358_080 Hb_012833_020--Hb_017358_080 Hb_000245_120 Hb_000245_120 Hb_012833_020--Hb_000245_120 Hb_001366_110 Hb_001366_110 Hb_012833_020--Hb_001366_110 Hb_003073_090 Hb_003073_090 Hb_000001_100--Hb_003073_090 Hb_041813_080 Hb_041813_080 Hb_000001_100--Hb_041813_080 Hb_001300_250 Hb_001300_250 Hb_000001_100--Hb_001300_250 Hb_000001_100--Hb_000245_120 Hb_000001_100--Hb_002173_050 Hb_000162_010 Hb_000162_010 Hb_000566_150--Hb_000162_010 Hb_002750_030 Hb_002750_030 Hb_000566_150--Hb_002750_030 Hb_006065_030 Hb_006065_030 Hb_000566_150--Hb_006065_030 Hb_000836_640 Hb_000836_640 Hb_000566_150--Hb_000836_640 Hb_001477_050 Hb_001477_050 Hb_000566_150--Hb_001477_050 Hb_005056_040 Hb_005056_040 Hb_000566_150--Hb_005056_040 Hb_002045_080 Hb_002045_080 Hb_002173_050--Hb_002045_080 Hb_000077_360 Hb_000077_360 Hb_002173_050--Hb_000077_360 Hb_001310_090 Hb_001310_090 Hb_002173_050--Hb_001310_090 Hb_002173_050--Hb_003073_090 Hb_003878_220 Hb_003878_220 Hb_002173_050--Hb_003878_220 Hb_000226_120 Hb_000226_120 Hb_017358_080--Hb_000226_120 Hb_000428_040 Hb_000428_040 Hb_017358_080--Hb_000428_040 Hb_147745_010 Hb_147745_010 Hb_017358_080--Hb_147745_010 Hb_000431_120 Hb_000431_120 Hb_017358_080--Hb_000431_120 Hb_116701_010 Hb_116701_010 Hb_017358_080--Hb_116701_010 Hb_168392_010 Hb_168392_010 Hb_017358_080--Hb_168392_010 Hb_005742_010 Hb_005742_010 Hb_000245_120--Hb_005742_010 Hb_000245_120--Hb_041813_080 Hb_002073_110 Hb_002073_110 Hb_000245_120--Hb_002073_110 Hb_006040_050 Hb_006040_050 Hb_000245_120--Hb_006040_050 Hb_027010_030 Hb_027010_030 Hb_000245_120--Hb_027010_030 Hb_143769_010 Hb_143769_010 Hb_000245_120--Hb_143769_010 Hb_158092_050 Hb_158092_050 Hb_001366_110--Hb_158092_050 Hb_000236_230 Hb_000236_230 Hb_001366_110--Hb_000236_230 Hb_001366_110--Hb_116701_010 Hb_000130_350 Hb_000130_350 Hb_001366_110--Hb_000130_350 Hb_000108_180 Hb_000108_180 Hb_001366_110--Hb_000108_180 Hb_001541_060 Hb_001541_060 Hb_001366_110--Hb_001541_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 1.59053 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.658869 0 1.40834

CAGE analysis