Hb_000431_120

Information

Type -
Description -
Location Contig431: 153510-154406
Sequence    

Annotation

kegg
ID rcu:RCOM_1676970
description hypothetical protein
nr
ID XP_012072694.1
description PREDICTED: glucuronoxylan 4-O-methyltransferase 1-like [Jatropha curcas]
swissprot
ID Q6NMK1
description Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana GN=GXM1 PE=1 SV=1
trembl
ID A0A067LG55
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10113 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000431_120 0.0 - - PREDICTED: glucuronoxylan 4-O-methyltransferase 1-like [Jatropha curcas]
2 Hb_168392_010 0.1901347261 - - multidrug resistance pump, putative [Ricinus communis]
3 Hb_004883_010 0.2088551024 - - hypothetical protein JCGZ_23144 [Jatropha curcas]
4 Hb_017358_080 0.2123661813 - - -
5 Hb_003304_110 0.2297358872 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000742_030 0.232726854 - - PREDICTED: uncharacterized protein LOC105636851 [Jatropha curcas]
7 Hb_000226_120 0.2618069537 - - PREDICTED: heparanase-like protein 3 isoform X1 [Jatropha curcas]
8 Hb_009662_070 0.2665577623 transcription factor TF Family: MIKC PREDICTED: truncated transcription factor CAULIFLOWER A-like [Jatropha curcas]
9 Hb_004024_020 0.2720404196 - - ankyrin repeat-containing protein, putative [Ricinus communis]
10 Hb_003377_010 0.272072304 - - hypothetical protein POPTR_0016s06140g, partial [Populus trichocarpa]
11 Hb_000510_280 0.2765818545 transcription factor TF Family: AUX/IAA PREDICTED: auxin-induced protein 22D-like [Jatropha curcas]
12 Hb_002968_050 0.2769556447 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
13 Hb_002025_040 0.2825293343 - - PREDICTED: WW domain-binding protein 4 [Jatropha curcas]
14 Hb_000005_140 0.2866617471 transcription factor TF Family: C2H2 unknown [Populus trichocarpa]
15 Hb_000192_020 0.2890769421 - - hypothetical protein JCGZ_17351 [Jatropha curcas]
16 Hb_019613_010 0.2942883828 - - ubiquitin-protein ligase, putative [Ricinus communis]
17 Hb_069338_010 0.2959176954 - - conserved hypothetical protein [Ricinus communis]
18 Hb_008695_220 0.2968963936 - - PREDICTED: uncharacterized protein LOC105638863 [Jatropha curcas]
19 Hb_057556_010 0.2996138856 - - Light-regulated protein precursor, putative [Ricinus communis]
20 Hb_000438_120 0.3007081245 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000431_120 Hb_000431_120 Hb_168392_010 Hb_168392_010 Hb_000431_120--Hb_168392_010 Hb_004883_010 Hb_004883_010 Hb_000431_120--Hb_004883_010 Hb_017358_080 Hb_017358_080 Hb_000431_120--Hb_017358_080 Hb_003304_110 Hb_003304_110 Hb_000431_120--Hb_003304_110 Hb_000742_030 Hb_000742_030 Hb_000431_120--Hb_000742_030 Hb_000226_120 Hb_000226_120 Hb_000431_120--Hb_000226_120 Hb_168392_010--Hb_004883_010 Hb_168392_010--Hb_017358_080 Hb_029622_040 Hb_029622_040 Hb_168392_010--Hb_029622_040 Hb_000510_280 Hb_000510_280 Hb_168392_010--Hb_000510_280 Hb_009662_070 Hb_009662_070 Hb_168392_010--Hb_009662_070 Hb_004883_010--Hb_000510_280 Hb_001936_170 Hb_001936_170 Hb_004883_010--Hb_001936_170 Hb_004883_010--Hb_000742_030 Hb_004883_010--Hb_003304_110 Hb_017358_080--Hb_000226_120 Hb_000428_040 Hb_000428_040 Hb_017358_080--Hb_000428_040 Hb_147745_010 Hb_147745_010 Hb_017358_080--Hb_147745_010 Hb_116701_010 Hb_116701_010 Hb_017358_080--Hb_116701_010 Hb_000192_020 Hb_000192_020 Hb_003304_110--Hb_000192_020 Hb_000345_080 Hb_000345_080 Hb_003304_110--Hb_000345_080 Hb_020805_140 Hb_020805_140 Hb_003304_110--Hb_020805_140 Hb_000094_200 Hb_000094_200 Hb_003304_110--Hb_000094_200 Hb_000438_120 Hb_000438_120 Hb_003304_110--Hb_000438_120 Hb_000107_350 Hb_000107_350 Hb_003304_110--Hb_000107_350 Hb_000742_030--Hb_000345_080 Hb_000175_260 Hb_000175_260 Hb_000742_030--Hb_000175_260 Hb_008695_220 Hb_008695_220 Hb_000742_030--Hb_008695_220 Hb_001195_070 Hb_001195_070 Hb_000742_030--Hb_001195_070 Hb_002205_170 Hb_002205_170 Hb_000742_030--Hb_002205_170 Hb_000294_050 Hb_000294_050 Hb_000742_030--Hb_000294_050 Hb_000236_230 Hb_000236_230 Hb_000226_120--Hb_000236_230 Hb_000226_120--Hb_147745_010 Hb_001366_110 Hb_001366_110 Hb_000226_120--Hb_001366_110 Hb_000226_120--Hb_000428_040 Hb_000165_020 Hb_000165_020 Hb_000226_120--Hb_000165_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0570505 1.2604 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.290668 0.411451 0.0834978 0 1.02012

CAGE analysis