Hb_004883_010

Information

Type -
Description -
Location Contig4883: 12427-14280
Sequence    

Annotation

kegg
ID rcu:RCOM_1437210
description receptor serine-threonine protein kinase, putative (EC:2.7.11.14)
nr
ID KDP23311.1
description hypothetical protein JCGZ_23144 [Jatropha curcas]
swissprot
ID Q9SFT7
description Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1
trembl
ID A0A067JHA7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23144 PE=3 SV=1
Gene Ontology
ID GO:0004674
description serine threonine-protein kinase at3g07070-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004883_010 0.0 - - hypothetical protein JCGZ_23144 [Jatropha curcas]
2 Hb_168392_010 0.1315696115 - - multidrug resistance pump, putative [Ricinus communis]
3 Hb_000431_120 0.2088551024 - - PREDICTED: glucuronoxylan 4-O-methyltransferase 1-like [Jatropha curcas]
4 Hb_000510_280 0.2276059612 transcription factor TF Family: AUX/IAA PREDICTED: auxin-induced protein 22D-like [Jatropha curcas]
5 Hb_001936_170 0.2295683693 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000742_030 0.2379651457 - - PREDICTED: uncharacterized protein LOC105636851 [Jatropha curcas]
7 Hb_003304_110 0.2441214185 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002592_020 0.2442809468 - - PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X1 [Jatropha curcas]
9 Hb_000345_080 0.2709297634 - - PREDICTED: protein RALF-like 33 [Jatropha curcas]
10 Hb_000920_230 0.2728088513 - - DNA binding protein, putative [Ricinus communis]
11 Hb_000438_120 0.2951608812 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
12 Hb_002968_050 0.2980608945 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
13 Hb_057556_010 0.3047242342 - - Light-regulated protein precursor, putative [Ricinus communis]
14 Hb_007416_100 0.308123624 - - PREDICTED: probable xyloglucan glycosyltransferase 5 [Jatropha curcas]
15 Hb_007574_040 0.3082681642 - - PREDICTED: uncharacterized protein LOC105638144 [Jatropha curcas]
16 Hb_017358_080 0.3083476562 - - -
17 Hb_009662_070 0.3084577392 transcription factor TF Family: MIKC PREDICTED: truncated transcription factor CAULIFLOWER A-like [Jatropha curcas]
18 Hb_008695_220 0.3091862119 - - PREDICTED: uncharacterized protein LOC105638863 [Jatropha curcas]
19 Hb_079513_010 0.3098700866 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 isoform X2 [Jatropha curcas]
20 Hb_000291_290 0.310897445 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_004883_010 Hb_004883_010 Hb_168392_010 Hb_168392_010 Hb_004883_010--Hb_168392_010 Hb_000431_120 Hb_000431_120 Hb_004883_010--Hb_000431_120 Hb_000510_280 Hb_000510_280 Hb_004883_010--Hb_000510_280 Hb_001936_170 Hb_001936_170 Hb_004883_010--Hb_001936_170 Hb_000742_030 Hb_000742_030 Hb_004883_010--Hb_000742_030 Hb_003304_110 Hb_003304_110 Hb_004883_010--Hb_003304_110 Hb_168392_010--Hb_000431_120 Hb_017358_080 Hb_017358_080 Hb_168392_010--Hb_017358_080 Hb_029622_040 Hb_029622_040 Hb_168392_010--Hb_029622_040 Hb_168392_010--Hb_000510_280 Hb_009662_070 Hb_009662_070 Hb_168392_010--Hb_009662_070 Hb_000431_120--Hb_017358_080 Hb_000431_120--Hb_003304_110 Hb_000431_120--Hb_000742_030 Hb_000226_120 Hb_000226_120 Hb_000431_120--Hb_000226_120 Hb_002968_050 Hb_002968_050 Hb_000510_280--Hb_002968_050 Hb_002592_020 Hb_002592_020 Hb_000510_280--Hb_002592_020 Hb_000445_120 Hb_000445_120 Hb_000510_280--Hb_000445_120 Hb_000264_040 Hb_000264_040 Hb_000510_280--Hb_000264_040 Hb_000094_170 Hb_000094_170 Hb_000510_280--Hb_000094_170 Hb_000438_120 Hb_000438_120 Hb_000510_280--Hb_000438_120 Hb_001959_250 Hb_001959_250 Hb_001936_170--Hb_001959_250 Hb_005615_060 Hb_005615_060 Hb_001936_170--Hb_005615_060 Hb_002081_170 Hb_002081_170 Hb_001936_170--Hb_002081_170 Hb_001936_170--Hb_000431_120 Hb_006452_230 Hb_006452_230 Hb_001936_170--Hb_006452_230 Hb_000345_080 Hb_000345_080 Hb_000742_030--Hb_000345_080 Hb_000175_260 Hb_000175_260 Hb_000742_030--Hb_000175_260 Hb_008695_220 Hb_008695_220 Hb_000742_030--Hb_008695_220 Hb_001195_070 Hb_001195_070 Hb_000742_030--Hb_001195_070 Hb_002205_170 Hb_002205_170 Hb_000742_030--Hb_002205_170 Hb_000294_050 Hb_000294_050 Hb_000742_030--Hb_000294_050 Hb_000192_020 Hb_000192_020 Hb_003304_110--Hb_000192_020 Hb_003304_110--Hb_000345_080 Hb_020805_140 Hb_020805_140 Hb_003304_110--Hb_020805_140 Hb_000094_200 Hb_000094_200 Hb_003304_110--Hb_000094_200 Hb_003304_110--Hb_000438_120 Hb_000107_350 Hb_000107_350 Hb_003304_110--Hb_000107_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0264394 0.115803 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0404494 0.0318182 0 0 0.0658587

CAGE analysis