Hb_000742_030

Information

Type -
Description -
Location Contig742: 20811-21227
Sequence    

Annotation

kegg
ID rcu:RCOM_1337980
description hypothetical protein
nr
ID XP_012075617.1
description PREDICTED: uncharacterized protein LOC105636851 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KFC4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09219 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000742_030 0.0 - - PREDICTED: uncharacterized protein LOC105636851 [Jatropha curcas]
2 Hb_000345_080 0.1532165126 - - PREDICTED: protein RALF-like 33 [Jatropha curcas]
3 Hb_000175_260 0.1756262918 - - PREDICTED: glucan endo-1,3-beta-glucosidase 14-like [Populus euphratica]
4 Hb_008695_220 0.1822602517 - - PREDICTED: uncharacterized protein LOC105638863 [Jatropha curcas]
5 Hb_001195_070 0.1971070279 - - PREDICTED: protein RER1B-like [Jatropha curcas]
6 Hb_002205_170 0.1987882503 - - PREDICTED: uncharacterized protein LOC105649179 [Jatropha curcas]
7 Hb_000294_050 0.201722153 - - PREDICTED: uncharacterized protein LOC105638579 [Jatropha curcas]
8 Hb_001004_080 0.2182192395 - - hypothetical protein POPTR_0014s14130g [Populus trichocarpa]
9 Hb_003304_110 0.2198144436 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000445_150 0.226783389 - - PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
11 Hb_003462_080 0.2268648331 - - Protein kinase APK1A, chloroplast precursor, putative [Ricinus communis]
12 Hb_001584_240 0.2290828092 - - ADP-ribosylation factor [Gossypium barbadense]
13 Hb_000496_110 0.2295364574 - - PREDICTED: uncharacterized protein LOC105650214 [Jatropha curcas]
14 Hb_000254_140 0.2313196832 - - PREDICTED: 30S ribosomal protein S17, chloroplastic [Jatropha curcas]
15 Hb_057556_010 0.2316380422 - - Light-regulated protein precursor, putative [Ricinus communis]
16 Hb_000431_120 0.232726854 - - PREDICTED: glucuronoxylan 4-O-methyltransferase 1-like [Jatropha curcas]
17 Hb_001584_130 0.2335929158 - - PREDICTED: uncharacterized protein LOC105647410 [Jatropha curcas]
18 Hb_011310_180 0.2343592952 - - PREDICTED: phospholipase D alpha 1-like isoform X1 [Jatropha curcas]
19 Hb_008699_030 0.2344404414 - - hypothetical protein CISIN_1g017963mg [Citrus sinensis]
20 Hb_000291_290 0.2370319916 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000742_030 Hb_000742_030 Hb_000345_080 Hb_000345_080 Hb_000742_030--Hb_000345_080 Hb_000175_260 Hb_000175_260 Hb_000742_030--Hb_000175_260 Hb_008695_220 Hb_008695_220 Hb_000742_030--Hb_008695_220 Hb_001195_070 Hb_001195_070 Hb_000742_030--Hb_001195_070 Hb_002205_170 Hb_002205_170 Hb_000742_030--Hb_002205_170 Hb_000294_050 Hb_000294_050 Hb_000742_030--Hb_000294_050 Hb_020805_140 Hb_020805_140 Hb_000345_080--Hb_020805_140 Hb_001584_240 Hb_001584_240 Hb_000345_080--Hb_001584_240 Hb_000345_080--Hb_000175_260 Hb_000345_080--Hb_000294_050 Hb_003304_110 Hb_003304_110 Hb_000345_080--Hb_003304_110 Hb_000175_260--Hb_001195_070 Hb_029920_060 Hb_029920_060 Hb_000175_260--Hb_029920_060 Hb_000254_140 Hb_000254_140 Hb_000175_260--Hb_000254_140 Hb_000175_260--Hb_000294_050 Hb_007574_040 Hb_007574_040 Hb_008695_220--Hb_007574_040 Hb_000950_030 Hb_000950_030 Hb_008695_220--Hb_000950_030 Hb_017002_010 Hb_017002_010 Hb_008695_220--Hb_017002_010 Hb_000246_130 Hb_000246_130 Hb_008695_220--Hb_000246_130 Hb_000455_070 Hb_000455_070 Hb_008695_220--Hb_000455_070 Hb_014720_100 Hb_014720_100 Hb_008695_220--Hb_014720_100 Hb_008699_030 Hb_008699_030 Hb_001195_070--Hb_008699_030 Hb_015675_030 Hb_015675_030 Hb_001195_070--Hb_015675_030 Hb_001195_070--Hb_001584_240 Hb_003103_010 Hb_003103_010 Hb_001195_070--Hb_003103_010 Hb_000671_130 Hb_000671_130 Hb_001195_070--Hb_000671_130 Hb_002205_170--Hb_001195_070 Hb_015941_050 Hb_015941_050 Hb_002205_170--Hb_015941_050 Hb_002205_170--Hb_000175_260 Hb_002205_170--Hb_001584_240 Hb_000007_200 Hb_000007_200 Hb_002205_170--Hb_000007_200 Hb_000294_050--Hb_001195_070 Hb_007477_050 Hb_007477_050 Hb_000294_050--Hb_007477_050 Hb_000294_050--Hb_003103_010 Hb_006153_030 Hb_006153_030 Hb_000294_050--Hb_006153_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.05922 2.56648 4.78008 37.9454 0.440564 2.91908
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.57882 12.7324 1.40685 0.799913 21.6527

CAGE analysis