Hb_001310_090

Information

Type -
Description -
Location Contig1310: 120955-127237
Sequence    

Annotation

kegg
ID tcc:TCM_000776
description Phototropic-responsive NPH3 family protein isoform 1
nr
ID XP_012079389.1
description PREDICTED: BTB/POZ domain-containing protein NPY5 [Jatropha curcas]
swissprot
ID O80970
description BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1
trembl
ID A0A067K7G2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12523 PE=4 SV=1
Gene Ontology
ID GO:0005515
description btb poz domain-containing protein npy4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09142: 120833-121390
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001310_090 0.0 - - PREDICTED: BTB/POZ domain-containing protein NPY5 [Jatropha curcas]
2 Hb_005599_060 0.2232864369 - - PREDICTED: syntaxin-72 isoform X1 [Jatropha curcas]
3 Hb_009707_030 0.2551165347 - - PREDICTED: ankyrin repeat-containing protein At5g02620 [Jatropha curcas]
4 Hb_002078_170 0.2576327494 - - ELMO/CED-12 domain-containing protein isoform 3 [Theobroma cacao]
5 Hb_002045_080 0.2577341266 - - PREDICTED: uncharacterized protein LOC105649907 [Jatropha curcas]
6 Hb_002173_050 0.262607223 - - UDP-glucosyltransferase, putative [Ricinus communis]
7 Hb_003197_010 0.2661386628 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004204_110 0.2728803572 - - PREDICTED: UDP-glucose 6-dehydrogenase 1-like [Jatropha curcas]
9 Hb_001488_190 0.2776846458 - - alpha-amylase, putative [Ricinus communis]
10 Hb_019863_100 0.2788769411 - - PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial-like [Jatropha curcas]
11 Hb_000032_450 0.28322999 - - PREDICTED: GDSL esterase/lipase At1g71691 [Jatropha curcas]
12 Hb_007534_060 0.2844343872 - - protein binding protein, putative [Ricinus communis]
13 Hb_002659_030 0.2861579693 - - copper transport protein atox1, putative [Ricinus communis]
14 Hb_003813_180 0.2865316278 - - sterol desaturase, putative [Ricinus communis]
15 Hb_001728_120 0.2875342263 - - hypothetical protein POPTR_0001s15540g, partial [Populus trichocarpa]
16 Hb_000477_040 0.2895606039 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003878_050 0.3050810186 - - PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Jatropha curcas]
18 Hb_004102_010 0.3057371576 - - F-box family protein [Theobroma cacao]
19 Hb_016564_010 0.3096071338 - - PREDICTED: uncharacterized protein LOC101764501 [Setaria italica]
20 Hb_000389_050 0.3106492593 - - PREDICTED: uncharacterized protein LOC105650917 [Jatropha curcas]

Gene co-expression network

sample Hb_001310_090 Hb_001310_090 Hb_005599_060 Hb_005599_060 Hb_001310_090--Hb_005599_060 Hb_009707_030 Hb_009707_030 Hb_001310_090--Hb_009707_030 Hb_002078_170 Hb_002078_170 Hb_001310_090--Hb_002078_170 Hb_002045_080 Hb_002045_080 Hb_001310_090--Hb_002045_080 Hb_002173_050 Hb_002173_050 Hb_001310_090--Hb_002173_050 Hb_003197_010 Hb_003197_010 Hb_001310_090--Hb_003197_010 Hb_005599_060--Hb_002078_170 Hb_183672_010 Hb_183672_010 Hb_005599_060--Hb_183672_010 Hb_000190_240 Hb_000190_240 Hb_005599_060--Hb_000190_240 Hb_000032_450 Hb_000032_450 Hb_005599_060--Hb_000032_450 Hb_001287_010 Hb_001287_010 Hb_005599_060--Hb_001287_010 Hb_001545_070 Hb_001545_070 Hb_009707_030--Hb_001545_070 Hb_009707_030--Hb_001287_010 Hb_007943_060 Hb_007943_060 Hb_009707_030--Hb_007943_060 Hb_117807_010 Hb_117807_010 Hb_009707_030--Hb_117807_010 Hb_000170_120 Hb_000170_120 Hb_009707_030--Hb_000170_120 Hb_000008_400 Hb_000008_400 Hb_009707_030--Hb_000008_400 Hb_002078_170--Hb_001287_010 Hb_002150_060 Hb_002150_060 Hb_002078_170--Hb_002150_060 Hb_006153_080 Hb_006153_080 Hb_002078_170--Hb_006153_080 Hb_001486_010 Hb_001486_010 Hb_002078_170--Hb_001486_010 Hb_059554_010 Hb_059554_010 Hb_002045_080--Hb_059554_010 Hb_001728_120 Hb_001728_120 Hb_002045_080--Hb_001728_120 Hb_001488_190 Hb_001488_190 Hb_002045_080--Hb_001488_190 Hb_002045_080--Hb_002173_050 Hb_012090_030 Hb_012090_030 Hb_002045_080--Hb_012090_030 Hb_003164_010 Hb_003164_010 Hb_002045_080--Hb_003164_010 Hb_000077_360 Hb_000077_360 Hb_002173_050--Hb_000077_360 Hb_012833_020 Hb_012833_020 Hb_002173_050--Hb_012833_020 Hb_003073_090 Hb_003073_090 Hb_002173_050--Hb_003073_090 Hb_003878_220 Hb_003878_220 Hb_002173_050--Hb_003878_220 Hb_003197_010--Hb_000077_360 Hb_004102_010 Hb_004102_010 Hb_003197_010--Hb_004102_010 Hb_003197_010--Hb_001488_190 Hb_017358_070 Hb_017358_070 Hb_003197_010--Hb_017358_070 Hb_000477_040 Hb_000477_040 Hb_003197_010--Hb_000477_040 Hb_000445_120 Hb_000445_120 Hb_003197_010--Hb_000445_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0611942 0.210648 1.60798 3.74041 0 0.00718298
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0347187 0.532737 5.18387 0.146442 1.68469

CAGE analysis