Hb_012150_060

Information

Type -
Description -
Location Contig12150: 52421-52900
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012150_060 0.0 - - -
2 Hb_014879_010 0.2667201875 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
3 Hb_001842_110 0.2689567634 transcription factor TF Family: ERF CBF-like transcription factor, putative [Ricinus communis]
4 Hb_000236_330 0.2771397631 - - PREDICTED: oligopeptide transporter 1-like isoform X1 [Jatropha curcas]
5 Hb_182750_010 0.2908976532 - - hypothetical protein MIMGU_mgv1a0001602mg, partial [Erythranthe guttata]
6 Hb_001206_010 0.3381070065 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
7 Hb_153258_020 0.3393368265 - - -
8 Hb_009393_060 0.3401583692 - - PREDICTED: uncharacterized protein LOC104878039 [Vitis vinifera]
9 Hb_025236_030 0.3481525963 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
10 Hb_027204_010 0.3619672528 - - -
11 Hb_069033_010 0.3641351641 desease resistance Gene Name: DUF720 hypothetical protein CICLE_v10002052mg [Citrus clementina]
12 Hb_000700_100 0.3709394084 - - PREDICTED: protein SULFUR DEFICIENCY-INDUCED 1 [Jatropha curcas]
13 Hb_000856_410 0.3710135969 - - ABC transporter family protein [Hevea brasiliensis]
14 Hb_137338_010 0.3735691731 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
15 Hb_181402_010 0.3760181868 - - PREDICTED: uncharacterized protein LOC104905886 [Beta vulgaris subsp. vulgaris]
16 Hb_000890_180 0.3778109243 - - glutaredoxin, grx, putative [Ricinus communis]
17 Hb_038044_020 0.3785739896 - - -
18 Hb_164019_010 0.3872884062 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
19 Hb_000179_230 0.3923108094 - - PREDICTED: myosin-17 [Jatropha curcas]
20 Hb_000640_280 0.393689136 - - Stachyose synthase precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_012150_060 Hb_012150_060 Hb_014879_010 Hb_014879_010 Hb_012150_060--Hb_014879_010 Hb_001842_110 Hb_001842_110 Hb_012150_060--Hb_001842_110 Hb_000236_330 Hb_000236_330 Hb_012150_060--Hb_000236_330 Hb_182750_010 Hb_182750_010 Hb_012150_060--Hb_182750_010 Hb_001206_010 Hb_001206_010 Hb_012150_060--Hb_001206_010 Hb_153258_020 Hb_153258_020 Hb_012150_060--Hb_153258_020 Hb_014879_010--Hb_001206_010 Hb_025236_030 Hb_025236_030 Hb_014879_010--Hb_025236_030 Hb_000172_130 Hb_000172_130 Hb_014879_010--Hb_000172_130 Hb_000101_260 Hb_000101_260 Hb_014879_010--Hb_000101_260 Hb_004981_010 Hb_004981_010 Hb_014879_010--Hb_004981_010 Hb_001842_110--Hb_000236_330 Hb_000890_180 Hb_000890_180 Hb_001842_110--Hb_000890_180 Hb_003540_220 Hb_003540_220 Hb_001842_110--Hb_003540_220 Hb_006501_140 Hb_006501_140 Hb_001842_110--Hb_006501_140 Hb_032718_010 Hb_032718_010 Hb_001842_110--Hb_032718_010 Hb_000236_330--Hb_000890_180 Hb_000035_420 Hb_000035_420 Hb_000236_330--Hb_000035_420 Hb_002341_040 Hb_002341_040 Hb_000236_330--Hb_002341_040 Hb_003867_030 Hb_003867_030 Hb_000236_330--Hb_003867_030 Hb_009393_060 Hb_009393_060 Hb_182750_010--Hb_009393_060 Hb_002760_040 Hb_002760_040 Hb_182750_010--Hb_002760_040 Hb_000179_230 Hb_000179_230 Hb_182750_010--Hb_000179_230 Hb_001248_110 Hb_001248_110 Hb_182750_010--Hb_001248_110 Hb_003086_050 Hb_003086_050 Hb_182750_010--Hb_003086_050 Hb_031295_010 Hb_031295_010 Hb_182750_010--Hb_031295_010 Hb_001206_010--Hb_000172_130 Hb_024411_010 Hb_024411_010 Hb_001206_010--Hb_024411_010 Hb_057451_040 Hb_057451_040 Hb_001206_010--Hb_057451_040 Hb_038044_020 Hb_038044_020 Hb_001206_010--Hb_038044_020 Hb_001062_020 Hb_001062_020 Hb_001206_010--Hb_001062_020 Hb_001050_020 Hb_001050_020 Hb_153258_020--Hb_001050_020 Hb_005754_030 Hb_005754_030 Hb_153258_020--Hb_005754_030 Hb_000920_290 Hb_000920_290 Hb_153258_020--Hb_000920_290 Hb_026698_030 Hb_026698_030 Hb_153258_020--Hb_026698_030 Hb_007317_090 Hb_007317_090 Hb_153258_020--Hb_007317_090 Hb_000589_420 Hb_000589_420 Hb_153258_020--Hb_000589_420
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.548938 0 0.0838384 0 0.121668
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.189502 0 0.208964

CAGE analysis