Hb_000035_420

Information

Type -
Description -
Location Contig35: 411976-414441
Sequence    

Annotation

kegg
ID rcu:RCOM_0920320
description Aspartic proteinase nepenthesin-2 precursor, putative
nr
ID XP_002515388.1
description Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
swissprot
ID Q9LHE3
description Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1
trembl
ID B9RNR9
description Aspartic proteinase nepenthesin-2, putative OS=Ricinus communis GN=RCOM_0920320 PE=3 SV=1
Gene Ontology
ID GO:0003677
description protein aspartic protease in guard cell 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000035_420 0.0 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
2 Hb_000245_270 0.1391470833 transcription factor TF Family: GRAS Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis]
3 Hb_004143_050 0.1643905661 - - PREDICTED: uncharacterized protein LOC105630712 [Jatropha curcas]
4 Hb_000506_130 0.1759837852 - - DGCR14-related family protein [Populus trichocarpa]
5 Hb_000172_080 0.1829355645 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Jatropha curcas]
6 Hb_166155_010 0.1833167638 - - PREDICTED: metalloendoproteinase 1 [Jatropha curcas]
7 Hb_034953_010 0.186192358 - - hypothetical protein JCGZ_00031 [Jatropha curcas]
8 Hb_004631_010 0.187221337 - - Early nodulin 20 precursor, putative [Ricinus communis]
9 Hb_000181_080 0.1898557275 transcription factor TF Family: ERF ethylene-responsive transcription factor 5 [Hevea brasiliensis]
10 Hb_001504_270 0.1903458002 - - PREDICTED: pleiotropic drug resistance protein 1-like [Jatropha curcas]
11 Hb_052113_020 0.1905346556 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
12 Hb_116349_090 0.192906722 - - PREDICTED: probable galacturonosyltransferase-like 9 [Jatropha curcas]
13 Hb_078901_010 0.196193138 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
14 Hb_000805_150 0.1975276631 transcription factor TF Family: GRAS transcription factor, putative [Ricinus communis]
15 Hb_000856_410 0.197632744 - - ABC transporter family protein [Hevea brasiliensis]
16 Hb_019516_050 0.1977682189 - - hypothetical protein JCGZ_04619 [Jatropha curcas]
17 Hb_000434_050 0.1999079745 transcription factor TF Family: ERF ethylene-responsive transcription factor 5 [Hevea brasiliensis]
18 Hb_125884_010 0.2008752847 - - PREDICTED: metalloendoproteinase 1-like [Jatropha curcas]
19 Hb_029238_020 0.2022867059 - - PREDICTED: expansin-like A1 [Jatropha curcas]
20 Hb_001956_190 0.2030186372 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]

Gene co-expression network

sample Hb_000035_420 Hb_000035_420 Hb_000245_270 Hb_000245_270 Hb_000035_420--Hb_000245_270 Hb_004143_050 Hb_004143_050 Hb_000035_420--Hb_004143_050 Hb_000506_130 Hb_000506_130 Hb_000035_420--Hb_000506_130 Hb_000172_080 Hb_000172_080 Hb_000035_420--Hb_000172_080 Hb_166155_010 Hb_166155_010 Hb_000035_420--Hb_166155_010 Hb_034953_010 Hb_034953_010 Hb_000035_420--Hb_034953_010 Hb_000245_270--Hb_000506_130 Hb_000805_150 Hb_000805_150 Hb_000245_270--Hb_000805_150 Hb_029238_020 Hb_029238_020 Hb_000245_270--Hb_029238_020 Hb_116349_090 Hb_116349_090 Hb_000245_270--Hb_116349_090 Hb_000245_270--Hb_004143_050 Hb_078901_010 Hb_078901_010 Hb_000245_270--Hb_078901_010 Hb_000742_260 Hb_000742_260 Hb_004143_050--Hb_000742_260 Hb_019026_030 Hb_019026_030 Hb_004143_050--Hb_019026_030 Hb_003800_010 Hb_003800_010 Hb_004143_050--Hb_003800_010 Hb_004143_050--Hb_000506_130 Hb_004143_050--Hb_029238_020 Hb_000506_140 Hb_000506_140 Hb_000506_130--Hb_000506_140 Hb_052113_020 Hb_052113_020 Hb_000506_130--Hb_052113_020 Hb_017434_020 Hb_017434_020 Hb_000506_130--Hb_017434_020 Hb_000506_130--Hb_029238_020 Hb_000359_080 Hb_000359_080 Hb_000172_080--Hb_000359_080 Hb_004166_010 Hb_004166_010 Hb_000172_080--Hb_004166_010 Hb_000172_080--Hb_078901_010 Hb_008253_040 Hb_008253_040 Hb_000172_080--Hb_008253_040 Hb_001345_030 Hb_001345_030 Hb_000172_080--Hb_001345_030 Hb_098160_010 Hb_098160_010 Hb_000172_080--Hb_098160_010 Hb_000625_040 Hb_000625_040 Hb_166155_010--Hb_000625_040 Hb_003376_150 Hb_003376_150 Hb_166155_010--Hb_003376_150 Hb_005048_080 Hb_005048_080 Hb_166155_010--Hb_005048_080 Hb_009786_010 Hb_009786_010 Hb_166155_010--Hb_009786_010 Hb_007305_040 Hb_007305_040 Hb_166155_010--Hb_007305_040 Hb_000398_200 Hb_000398_200 Hb_166155_010--Hb_000398_200 Hb_000342_120 Hb_000342_120 Hb_034953_010--Hb_000342_120 Hb_005588_130 Hb_005588_130 Hb_034953_010--Hb_005588_130 Hb_004730_010 Hb_004730_010 Hb_034953_010--Hb_004730_010 Hb_002004_010 Hb_002004_010 Hb_034953_010--Hb_002004_010 Hb_001699_030 Hb_001699_030 Hb_034953_010--Hb_001699_030 Hb_013691_060 Hb_013691_060 Hb_034953_010--Hb_013691_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0919217 3.31885 0.204182 1.10829 0.0655812 0.0101073
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0262523 0.123929 0.234081 0.139893 0.565019

CAGE analysis