Hb_001206_010

Information

Type -
Description -
Location Contig1206: 23733-26119
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012479950.1
description PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
swissprot
ID -
description -
trembl
ID A0A067KAM7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19461 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001206_010 0.0 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
2 Hb_014879_010 0.2398476372 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
3 Hb_000172_130 0.2669749759 - - hypothetical protein JCGZ_24076 [Jatropha curcas]
4 Hb_024411_010 0.2680685698 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
5 Hb_057451_040 0.2705674124 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_038044_020 0.2811175674 - - -
7 Hb_001062_020 0.2858409965 - - PREDICTED: uncharacterized protein LOC103962405 [Pyrus x bretschneideri]
8 Hb_000101_260 0.2954149979 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_013080_010 0.2981392179 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
10 Hb_086607_010 0.310768063 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
11 Hb_004195_220 0.3141920914 - - hypothetical protein PRUPE_ppa005288mg [Prunus persica]
12 Hb_002791_020 0.3148986593 - - hypothetical protein AALP_AA5G271700 [Arabis alpina]
13 Hb_000711_020 0.3162430418 - - major allergen Pru ar 1-like [Jatropha curcas]
14 Hb_143874_010 0.3273745217 - - PREDICTED: uncharacterized protein LOC105794100 [Gossypium raimondii]
15 Hb_001446_010 0.3274605093 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
16 Hb_001282_030 0.329904531 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
17 Hb_115656_010 0.3348778685 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
18 Hb_012150_060 0.3381070065 - - -
19 Hb_011663_020 0.3386237693 - - Putative retrotransposon protein, identical [Solanum demissum]
20 Hb_025236_030 0.341641031 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]

Gene co-expression network

sample Hb_001206_010 Hb_001206_010 Hb_014879_010 Hb_014879_010 Hb_001206_010--Hb_014879_010 Hb_000172_130 Hb_000172_130 Hb_001206_010--Hb_000172_130 Hb_024411_010 Hb_024411_010 Hb_001206_010--Hb_024411_010 Hb_057451_040 Hb_057451_040 Hb_001206_010--Hb_057451_040 Hb_038044_020 Hb_038044_020 Hb_001206_010--Hb_038044_020 Hb_001062_020 Hb_001062_020 Hb_001206_010--Hb_001062_020 Hb_012150_060 Hb_012150_060 Hb_014879_010--Hb_012150_060 Hb_025236_030 Hb_025236_030 Hb_014879_010--Hb_025236_030 Hb_014879_010--Hb_000172_130 Hb_000101_260 Hb_000101_260 Hb_014879_010--Hb_000101_260 Hb_004981_010 Hb_004981_010 Hb_014879_010--Hb_004981_010 Hb_004195_220 Hb_004195_220 Hb_000172_130--Hb_004195_220 Hb_167183_010 Hb_167183_010 Hb_000172_130--Hb_167183_010 Hb_000172_130--Hb_057451_040 Hb_143874_010 Hb_143874_010 Hb_000172_130--Hb_143874_010 Hb_151320_010 Hb_151320_010 Hb_000172_130--Hb_151320_010 Hb_013080_010 Hb_013080_010 Hb_024411_010--Hb_013080_010 Hb_053079_010 Hb_053079_010 Hb_024411_010--Hb_053079_010 Hb_086607_010 Hb_086607_010 Hb_024411_010--Hb_086607_010 Hb_002687_070 Hb_002687_070 Hb_024411_010--Hb_002687_070 Hb_000518_040 Hb_000518_040 Hb_024411_010--Hb_000518_040 Hb_171685_020 Hb_171685_020 Hb_024411_010--Hb_171685_020 Hb_000268_100 Hb_000268_100 Hb_057451_040--Hb_000268_100 Hb_011478_010 Hb_011478_010 Hb_057451_040--Hb_011478_010 Hb_003711_030 Hb_003711_030 Hb_057451_040--Hb_003711_030 Hb_115656_010 Hb_115656_010 Hb_057451_040--Hb_115656_010 Hb_004212_040 Hb_004212_040 Hb_057451_040--Hb_004212_040 Hb_002025_090 Hb_002025_090 Hb_057451_040--Hb_002025_090 Hb_005896_010 Hb_005896_010 Hb_038044_020--Hb_005896_010 Hb_000626_040 Hb_000626_040 Hb_038044_020--Hb_000626_040 Hb_000840_040 Hb_000840_040 Hb_038044_020--Hb_000840_040 Hb_007042_010 Hb_007042_010 Hb_038044_020--Hb_007042_010 Hb_003206_080 Hb_003206_080 Hb_038044_020--Hb_003206_080 Hb_115376_010 Hb_115376_010 Hb_001062_020--Hb_115376_010 Hb_002791_020 Hb_002791_020 Hb_001062_020--Hb_002791_020 Hb_011663_020 Hb_011663_020 Hb_001062_020--Hb_011663_020 Hb_001062_020--Hb_057451_040 Hb_063405_020 Hb_063405_020 Hb_001062_020--Hb_063405_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0795433 0 0 0 0.0306618
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0866357 0.019194 0.0962031

CAGE analysis