Hb_003206_080

Information

Type transcription factor
Description TF Family: HB
Location Contig3206: 147481-149176
Sequence    

Annotation

kegg
ID pxb:103934802
description homeobox-leucine zipper protein HAT22-like
nr
ID XP_012087666.1
description PREDICTED: homeobox-leucine zipper protein HAT22-like [Jatropha curcas]
swissprot
ID P46604
description Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1
trembl
ID A0A067JXN2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25478 PE=4 SV=1
Gene Ontology
ID GO:0005634
description homeobox-leucine zipper protein hat22-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003206_080 0.0 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT22-like [Jatropha curcas]
2 Hb_003349_100 0.1757049508 - - conserved hypothetical protein [Ricinus communis]
3 Hb_005896_010 0.2821426841 - - -
4 Hb_003097_050 0.2894699899 - - hypothetical protein POPTR_0007s07150g [Populus trichocarpa]
5 Hb_035687_010 0.29405008 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
6 Hb_038044_020 0.2985129738 - - -
7 Hb_001221_370 0.3081977599 - - hypothetical protein MIMGU_mgv1a020064mg, partial [Erythranthe guttata]
8 Hb_000840_040 0.3143661605 - - monoxygenase, putative [Ricinus communis]
9 Hb_000475_050 0.3158065343 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
10 Hb_000626_040 0.3217363957 - - PREDICTED: TATA-box-binding protein 1-like [Jatropha curcas]
11 Hb_003406_030 0.3222052714 - - PREDICTED: uncharacterized protein LOC104774100 [Camelina sativa]
12 Hb_005016_110 0.3244103754 - - -
13 Hb_011986_010 0.3314338619 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
14 Hb_000640_030 0.3315858187 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
15 Hb_005731_150 0.3439738493 - - PREDICTED: uncharacterized protein LOC105630360 [Jatropha curcas]
16 Hb_006683_030 0.3445591595 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
17 Hb_001188_120 0.350104704 - - hypothetical protein JCGZ_05575 [Jatropha curcas]
18 Hb_001206_010 0.3511121393 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
19 Hb_013080_010 0.354707648 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
20 Hb_005511_090 0.3576978628 - - PREDICTED: probable ubiquitin-conjugating enzyme E2 C isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_003206_080 Hb_003206_080 Hb_003349_100 Hb_003349_100 Hb_003206_080--Hb_003349_100 Hb_005896_010 Hb_005896_010 Hb_003206_080--Hb_005896_010 Hb_003097_050 Hb_003097_050 Hb_003206_080--Hb_003097_050 Hb_035687_010 Hb_035687_010 Hb_003206_080--Hb_035687_010 Hb_038044_020 Hb_038044_020 Hb_003206_080--Hb_038044_020 Hb_001221_370 Hb_001221_370 Hb_003206_080--Hb_001221_370 Hb_003349_100--Hb_003097_050 Hb_005731_150 Hb_005731_150 Hb_003349_100--Hb_005731_150 Hb_000640_030 Hb_000640_030 Hb_003349_100--Hb_000640_030 Hb_005511_090 Hb_005511_090 Hb_003349_100--Hb_005511_090 Hb_012753_010 Hb_012753_010 Hb_003349_100--Hb_012753_010 Hb_006683_030 Hb_006683_030 Hb_005896_010--Hb_006683_030 Hb_002656_010 Hb_002656_010 Hb_005896_010--Hb_002656_010 Hb_159198_010 Hb_159198_010 Hb_005896_010--Hb_159198_010 Hb_000840_040 Hb_000840_040 Hb_005896_010--Hb_000840_040 Hb_008749_090 Hb_008749_090 Hb_005896_010--Hb_008749_090 Hb_003517_010 Hb_003517_010 Hb_005896_010--Hb_003517_010 Hb_000054_110 Hb_000054_110 Hb_003097_050--Hb_000054_110 Hb_167977_010 Hb_167977_010 Hb_003097_050--Hb_167977_010 Hb_004505_030 Hb_004505_030 Hb_003097_050--Hb_004505_030 Hb_006736_010 Hb_006736_010 Hb_003097_050--Hb_006736_010 Hb_000141_010 Hb_000141_010 Hb_003097_050--Hb_000141_010 Hb_035687_010--Hb_001221_370 Hb_004212_040 Hb_004212_040 Hb_035687_010--Hb_004212_040 Hb_000205_340 Hb_000205_340 Hb_035687_010--Hb_000205_340 Hb_002571_090 Hb_002571_090 Hb_035687_010--Hb_002571_090 Hb_143874_010 Hb_143874_010 Hb_035687_010--Hb_143874_010 Hb_038044_020--Hb_005896_010 Hb_001206_010 Hb_001206_010 Hb_038044_020--Hb_001206_010 Hb_000626_040 Hb_000626_040 Hb_038044_020--Hb_000626_040 Hb_038044_020--Hb_000840_040 Hb_007042_010 Hb_007042_010 Hb_038044_020--Hb_007042_010 Hb_000904_100 Hb_000904_100 Hb_001221_370--Hb_000904_100 Hb_001462_020 Hb_001462_020 Hb_001221_370--Hb_001462_020 Hb_071586_010 Hb_071586_010 Hb_001221_370--Hb_071586_010 Hb_096671_010 Hb_096671_010 Hb_001221_370--Hb_096671_010 Hb_187513_010 Hb_187513_010 Hb_001221_370--Hb_187513_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.233243 0 0 0.0634725 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.206475 0.209461 0.227418

CAGE analysis