Hb_001221_370

Information

Type -
Description -
Location Contig1221: 254781-256504
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa019090mg
description hypothetical protein
nr
ID EYU41852.1
description hypothetical protein MIMGU_mgv1a020064mg, partial [Erythranthe guttata]
swissprot
ID Q9FZ70
description F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana GN=At1g13570 PE=2 SV=1
trembl
ID A0A022RN00
description Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a020064mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001221_370 0.0 - - hypothetical protein MIMGU_mgv1a020064mg, partial [Erythranthe guttata]
2 Hb_035687_010 0.2017397972 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
3 Hb_000904_100 0.2843969508 - - hypothetical protein JCGZ_03883 [Jatropha curcas]
4 Hb_001462_020 0.2844573839 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
5 Hb_071586_010 0.2846857236 - - PREDICTED: uncharacterized protein LOC105632410 [Jatropha curcas]
6 Hb_096671_010 0.2847929071 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
7 Hb_187513_010 0.294315678 - - PREDICTED: uncharacterized protein LOC105761922 [Gossypium raimondii]
8 Hb_002571_090 0.294847896 - - -
9 Hb_000296_060 0.2977083913 - - -
10 Hb_003226_290 0.3024033095 - - catalytic, putative [Ricinus communis]
11 Hb_000574_550 0.3036117219 - - PREDICTED: SNF1-related protein kinase regulatory subunit gamma-like PV42a [Jatropha curcas]
12 Hb_003206_080 0.3081977599 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT22-like [Jatropha curcas]
13 Hb_143874_010 0.3083275602 - - PREDICTED: uncharacterized protein LOC105794100 [Gossypium raimondii]
14 Hb_177179_010 0.3095229295 - - PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Populus euphratica]
15 Hb_000205_340 0.3160947448 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
16 Hb_069783_020 0.320069248 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
17 Hb_012424_010 0.3217076229 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
18 Hb_003551_030 0.3255570745 - - hypothetical protein POPTR_0016s03850g [Populus trichocarpa]
19 Hb_089173_010 0.3295888975 - - PREDICTED: uncharacterized protein LOC105636883 [Jatropha curcas]
20 Hb_000065_050 0.3318200642 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]

Gene co-expression network

sample Hb_001221_370 Hb_001221_370 Hb_035687_010 Hb_035687_010 Hb_001221_370--Hb_035687_010 Hb_000904_100 Hb_000904_100 Hb_001221_370--Hb_000904_100 Hb_001462_020 Hb_001462_020 Hb_001221_370--Hb_001462_020 Hb_071586_010 Hb_071586_010 Hb_001221_370--Hb_071586_010 Hb_096671_010 Hb_096671_010 Hb_001221_370--Hb_096671_010 Hb_187513_010 Hb_187513_010 Hb_001221_370--Hb_187513_010 Hb_004212_040 Hb_004212_040 Hb_035687_010--Hb_004212_040 Hb_000205_340 Hb_000205_340 Hb_035687_010--Hb_000205_340 Hb_002571_090 Hb_002571_090 Hb_035687_010--Hb_002571_090 Hb_003206_080 Hb_003206_080 Hb_035687_010--Hb_003206_080 Hb_143874_010 Hb_143874_010 Hb_035687_010--Hb_143874_010 Hb_000904_100--Hb_096671_010 Hb_000904_100--Hb_001462_020 Hb_000904_100--Hb_071586_010 Hb_001956_030 Hb_001956_030 Hb_000904_100--Hb_001956_030 Hb_089173_010 Hb_089173_010 Hb_000904_100--Hb_089173_010 Hb_003777_010 Hb_003777_010 Hb_000904_100--Hb_003777_010 Hb_001462_020--Hb_071586_010 Hb_001462_020--Hb_096671_010 Hb_001462_020--Hb_003777_010 Hb_001462_020--Hb_001956_030 Hb_001462_020--Hb_089173_010 Hb_071586_010--Hb_096671_010 Hb_071586_010--Hb_003777_010 Hb_071586_010--Hb_001956_030 Hb_071586_010--Hb_089173_010 Hb_096671_010--Hb_001956_030 Hb_096671_010--Hb_089173_010 Hb_096671_010--Hb_003777_010 Hb_069783_020 Hb_069783_020 Hb_187513_010--Hb_069783_020 Hb_000296_060 Hb_000296_060 Hb_187513_010--Hb_000296_060 Hb_000574_550 Hb_000574_550 Hb_187513_010--Hb_000574_550 Hb_187513_010--Hb_002571_090 Hb_012424_010 Hb_012424_010 Hb_187513_010--Hb_012424_010 Hb_003551_030 Hb_003551_030 Hb_187513_010--Hb_003551_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.254998 0 0 0.0409241 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 1.08634 0.316151 0.241495

CAGE analysis