Hb_004195_220

Information

Type -
Description -
Location Contig4195: 186994-187845
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa005288mg
description hypothetical protein
nr
ID XP_007204335.1
description hypothetical protein PRUPE_ppa005288mg [Prunus persica]
swissprot
ID -
description -
trembl
ID M5VVV0
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005288mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004195_220 0.0 - - hypothetical protein PRUPE_ppa005288mg [Prunus persica]
2 Hb_151320_010 0.1710907618 - - -
3 Hb_132384_010 0.2436248416 - - hypothetical protein VITISV_018559 [Vitis vinifera]
4 Hb_000172_130 0.2556548789 - - hypothetical protein JCGZ_24076 [Jatropha curcas]
5 Hb_053079_010 0.2808883225 - - polyprotein [Citrus endogenous pararetrovirus]
6 Hb_170156_010 0.2998963137 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
7 Hb_007790_040 0.3010244413 - - PREDICTED: uncharacterized protein LOC104417177 [Eucalyptus grandis]
8 Hb_013080_010 0.3019617327 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
9 Hb_013420_120 0.3078768402 - - -
10 Hb_001369_430 0.3105083632 - - PREDICTED: uncharacterized protein LOC105648869 [Jatropha curcas]
11 Hb_028998_010 0.3105171771 - - -
12 Hb_000110_110 0.3105368837 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
13 Hb_089844_010 0.3105423262 - - -
14 Hb_026405_010 0.3105464133 - - PREDICTED: uncharacterized protein LOC104107896 [Nicotiana tomentosiformis]
15 Hb_009577_010 0.3105473224 - - -
16 Hb_001168_090 0.3105518494 - - PREDICTED: uncharacterized protein LOC104246050 [Nicotiana sylvestris]
17 Hb_181107_010 0.3105580266 - - hypothetical protein, partial [Pseudomonas tolaasii]
18 Hb_000029_430 0.3105645321 - - PREDICTED: adenylate isopentenyltransferase 5, chloroplastic-like [Jatropha curcas]
19 Hb_113614_010 0.3105659955 - - hypothetical protein VITISV_001308 [Vitis vinifera]
20 Hb_039316_010 0.3105666517 - - PREDICTED: uncharacterized protein LOC105771917 [Gossypium raimondii]

Gene co-expression network

sample Hb_004195_220 Hb_004195_220 Hb_151320_010 Hb_151320_010 Hb_004195_220--Hb_151320_010 Hb_132384_010 Hb_132384_010 Hb_004195_220--Hb_132384_010 Hb_000172_130 Hb_000172_130 Hb_004195_220--Hb_000172_130 Hb_053079_010 Hb_053079_010 Hb_004195_220--Hb_053079_010 Hb_170156_010 Hb_170156_010 Hb_004195_220--Hb_170156_010 Hb_007790_040 Hb_007790_040 Hb_004195_220--Hb_007790_040 Hb_013420_120 Hb_013420_120 Hb_151320_010--Hb_013420_120 Hb_000987_110 Hb_000987_110 Hb_151320_010--Hb_000987_110 Hb_141425_010 Hb_141425_010 Hb_151320_010--Hb_141425_010 Hb_123396_010 Hb_123396_010 Hb_151320_010--Hb_123396_010 Hb_005742_010 Hb_005742_010 Hb_151320_010--Hb_005742_010 Hb_087203_010 Hb_087203_010 Hb_132384_010--Hb_087203_010 Hb_033623_040 Hb_033623_040 Hb_132384_010--Hb_033623_040 Hb_002493_010 Hb_002493_010 Hb_132384_010--Hb_002493_010 Hb_132384_010--Hb_151320_010 Hb_011242_020 Hb_011242_020 Hb_132384_010--Hb_011242_020 Hb_167183_010 Hb_167183_010 Hb_000172_130--Hb_167183_010 Hb_057451_040 Hb_057451_040 Hb_000172_130--Hb_057451_040 Hb_001206_010 Hb_001206_010 Hb_000172_130--Hb_001206_010 Hb_143874_010 Hb_143874_010 Hb_000172_130--Hb_143874_010 Hb_000172_130--Hb_151320_010 Hb_013080_010 Hb_013080_010 Hb_053079_010--Hb_013080_010 Hb_024411_010 Hb_024411_010 Hb_053079_010--Hb_024411_010 Hb_006040_050 Hb_006040_050 Hb_053079_010--Hb_006040_050 Hb_005466_010 Hb_005466_010 Hb_053079_010--Hb_005466_010 Hb_027010_030 Hb_027010_030 Hb_053079_010--Hb_027010_030 Hb_053079_010--Hb_151320_010 Hb_002791_020 Hb_002791_020 Hb_170156_010--Hb_002791_020 Hb_000101_150 Hb_000101_150 Hb_170156_010--Hb_000101_150 Hb_170559_010 Hb_170559_010 Hb_170156_010--Hb_170559_010 Hb_000159_020 Hb_000159_020 Hb_170156_010--Hb_000159_020 Hb_003406_030 Hb_003406_030 Hb_170156_010--Hb_003406_030 Hb_170156_010--Hb_151320_010 Hb_106815_010 Hb_106815_010 Hb_007790_040--Hb_106815_010 Hb_115376_010 Hb_115376_010 Hb_007790_040--Hb_115376_010 Hb_000191_120 Hb_000191_120 Hb_007790_040--Hb_000191_120 Hb_006157_050 Hb_006157_050 Hb_007790_040--Hb_006157_050 Hb_065943_010 Hb_065943_010 Hb_007790_040--Hb_065943_010 Hb_004078_030 Hb_004078_030 Hb_007790_040--Hb_004078_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.281602 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.619532 0 0.66384

CAGE analysis