Hb_000191_120

Information

Type -
Description -
Location Contig191: 130022-137084
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000191_120 0.0 - - -
2 Hb_000465_420 0.1973250577 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105632322 [Jatropha curcas]
3 Hb_010757_010 0.2178367828 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
4 Hb_173468_010 0.222949269 - - Vacuolar sorting receptor 1 precursor, putative [Ricinus communis]
5 Hb_007790_040 0.2356644252 - - PREDICTED: uncharacterized protein LOC104417177 [Eucalyptus grandis]
6 Hb_106815_010 0.2991007302 - - hypothetical protein, conserved [Eimeria acervulina]
7 Hb_181240_010 0.3005282515 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
8 Hb_014568_020 0.3127767157 - - PREDICTED: GPI mannosyltransferase 2 [Jatropha curcas]
9 Hb_003005_040 0.3286471945 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
10 Hb_017184_010 0.3316605153 - - PREDICTED: uncharacterized protein LOC105778857 [Gossypium raimondii]
11 Hb_001952_080 0.3316605188 - - PREDICTED: uncharacterized protein LOC105042236 isoform X2 [Elaeis guineensis]
12 Hb_039316_010 0.3316605315 - - PREDICTED: uncharacterized protein LOC105771917 [Gossypium raimondii]
13 Hb_113614_010 0.3316605417 - - hypothetical protein VITISV_001308 [Vitis vinifera]
14 Hb_000029_430 0.3316605729 - - PREDICTED: adenylate isopentenyltransferase 5, chloroplastic-like [Jatropha curcas]
15 Hb_181107_010 0.3316608589 - - hypothetical protein, partial [Pseudomonas tolaasii]
16 Hb_004989_010 0.3316610165 - - retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa Japonica Group]
17 Hb_008601_020 0.331661104 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
18 Hb_004019_060 0.3316611149 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
19 Hb_004078_030 0.331661154 - - Putative polyprotein, identical [Solanum demissum]
20 Hb_001168_090 0.3316613736 - - PREDICTED: uncharacterized protein LOC104246050 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_000191_120 Hb_000191_120 Hb_000465_420 Hb_000465_420 Hb_000191_120--Hb_000465_420 Hb_010757_010 Hb_010757_010 Hb_000191_120--Hb_010757_010 Hb_173468_010 Hb_173468_010 Hb_000191_120--Hb_173468_010 Hb_007790_040 Hb_007790_040 Hb_000191_120--Hb_007790_040 Hb_106815_010 Hb_106815_010 Hb_000191_120--Hb_106815_010 Hb_181240_010 Hb_181240_010 Hb_000191_120--Hb_181240_010 Hb_000465_420--Hb_173468_010 Hb_000465_420--Hb_010757_010 Hb_012447_010 Hb_012447_010 Hb_000465_420--Hb_012447_010 Hb_000465_420--Hb_007790_040 Hb_056199_030 Hb_056199_030 Hb_000465_420--Hb_056199_030 Hb_010757_010--Hb_181240_010 Hb_010757_010--Hb_173468_010 Hb_010757_010--Hb_007790_040 Hb_008730_010 Hb_008730_010 Hb_010757_010--Hb_008730_010 Hb_173468_010--Hb_012447_010 Hb_173468_010--Hb_007790_040 Hb_010736_030 Hb_010736_030 Hb_173468_010--Hb_010736_030 Hb_007790_040--Hb_106815_010 Hb_115376_010 Hb_115376_010 Hb_007790_040--Hb_115376_010 Hb_006157_050 Hb_006157_050 Hb_007790_040--Hb_006157_050 Hb_065943_010 Hb_065943_010 Hb_007790_040--Hb_065943_010 Hb_004078_030 Hb_004078_030 Hb_007790_040--Hb_004078_030 Hb_002869_070 Hb_002869_070 Hb_106815_010--Hb_002869_070 Hb_004124_010 Hb_004124_010 Hb_106815_010--Hb_004124_010 Hb_006933_010 Hb_006933_010 Hb_106815_010--Hb_006933_010 Hb_106815_010--Hb_006157_050 Hb_106815_010--Hb_065943_010 Hb_099723_010 Hb_099723_010 Hb_106815_010--Hb_099723_010 Hb_004734_050 Hb_004734_050 Hb_181240_010--Hb_004734_050 Hb_000915_030 Hb_000915_030 Hb_181240_010--Hb_000915_030 Hb_004324_080 Hb_004324_080 Hb_181240_010--Hb_004324_080 Hb_014568_020 Hb_014568_020 Hb_181240_010--Hb_014568_020 Hb_000608_460 Hb_000608_460 Hb_181240_010--Hb_000608_460 Hb_003005_040 Hb_003005_040 Hb_181240_010--Hb_003005_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.03416 0.0633556 0 0.070464

CAGE analysis