Hb_010736_030

Information

Type -
Description -
Location Contig10736: 35183-41478
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010736_030 0.0 - - -
2 Hb_001369_430 0.143900404 - - PREDICTED: uncharacterized protein LOC105648869 [Jatropha curcas]
3 Hb_028998_010 0.1445236018 - - -
4 Hb_000110_110 0.1456973316 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
5 Hb_089844_010 0.1459846536 - - -
6 Hb_026405_010 0.1461924231 - - PREDICTED: uncharacterized protein LOC104107896 [Nicotiana tomentosiformis]
7 Hb_009577_010 0.1462377805 - - -
8 Hb_001168_090 0.1464592859 - - PREDICTED: uncharacterized protein LOC104246050 [Nicotiana sylvestris]
9 Hb_181107_010 0.1467507569 - - hypothetical protein, partial [Pseudomonas tolaasii]
10 Hb_000029_430 0.1470456998 - - PREDICTED: adenylate isopentenyltransferase 5, chloroplastic-like [Jatropha curcas]
11 Hb_113614_010 0.1471104859 - - hypothetical protein VITISV_001308 [Vitis vinifera]
12 Hb_039316_010 0.1471393624 - - PREDICTED: uncharacterized protein LOC105771917 [Gossypium raimondii]
13 Hb_001952_080 0.1471909988 - - PREDICTED: uncharacterized protein LOC105042236 isoform X2 [Elaeis guineensis]
14 Hb_017184_010 0.147295526 - - PREDICTED: uncharacterized protein LOC105778857 [Gossypium raimondii]
15 Hb_004989_010 0.1478644122 - - retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa Japonica Group]
16 Hb_008601_020 0.1479151667 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
17 Hb_004019_060 0.1479212472 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
18 Hb_004078_030 0.1479425658 - - Putative polyprotein, identical [Solanum demissum]
19 Hb_001987_010 0.2041211925 - - -
20 Hb_001693_040 0.2120186352 - - -

Gene co-expression network

sample Hb_010736_030 Hb_010736_030 Hb_001369_430 Hb_001369_430 Hb_010736_030--Hb_001369_430 Hb_028998_010 Hb_028998_010 Hb_010736_030--Hb_028998_010 Hb_000110_110 Hb_000110_110 Hb_010736_030--Hb_000110_110 Hb_089844_010 Hb_089844_010 Hb_010736_030--Hb_089844_010 Hb_026405_010 Hb_026405_010 Hb_010736_030--Hb_026405_010 Hb_009577_010 Hb_009577_010 Hb_010736_030--Hb_009577_010 Hb_001369_430--Hb_028998_010 Hb_001369_430--Hb_000110_110 Hb_001369_430--Hb_089844_010 Hb_001369_430--Hb_026405_010 Hb_001369_430--Hb_009577_010 Hb_001168_090 Hb_001168_090 Hb_001369_430--Hb_001168_090 Hb_028998_010--Hb_000110_110 Hb_028998_010--Hb_089844_010 Hb_028998_010--Hb_026405_010 Hb_028998_010--Hb_009577_010 Hb_028998_010--Hb_001168_090 Hb_000110_110--Hb_089844_010 Hb_000110_110--Hb_026405_010 Hb_000110_110--Hb_009577_010 Hb_000110_110--Hb_001168_090 Hb_181107_010 Hb_181107_010 Hb_000110_110--Hb_181107_010 Hb_089844_010--Hb_026405_010 Hb_089844_010--Hb_009577_010 Hb_089844_010--Hb_001168_090 Hb_089844_010--Hb_181107_010 Hb_000029_430 Hb_000029_430 Hb_089844_010--Hb_000029_430 Hb_026405_010--Hb_009577_010 Hb_026405_010--Hb_001168_090 Hb_026405_010--Hb_181107_010 Hb_026405_010--Hb_000029_430 Hb_009577_010--Hb_001168_090 Hb_009577_010--Hb_181107_010 Hb_009577_010--Hb_000029_430
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.448668 0 0.246791

CAGE analysis