Hb_056199_030

Information

Type -
Description -
Location Contig56199: 7978-9188
Sequence    

Annotation

kegg
ID rcu:RCOM_1038370
description purine transporter, putative
nr
ID XP_012459602.1
description PREDICTED: purine permease 3-like isoform X2 [Gossypium raimondii]
swissprot
ID Q9FZ95
description Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 PE=2 SV=1
trembl
ID A0A0D2V5D8
description Gossypium raimondii chromosome 12, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_012G143200 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_056199_030 0.0 - - PREDICTED: purine permease 3-like isoform X2 [Gossypium raimondii]
2 Hb_012447_010 0.2076548892 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
3 Hb_000144_040 0.261847255 - - hypothetical protein POPTR_0006s06790g [Populus trichocarpa]
4 Hb_000173_440 0.2635394155 - - YALI0B05280p [Yarrowia lipolytica]
5 Hb_007181_020 0.2815103821 - - PREDICTED: uncharacterized protein At4g04980-like [Populus euphratica]
6 Hb_010883_130 0.2934967138 - - PREDICTED: pentatricopeptide repeat-containing protein At4g08210 [Jatropha curcas]
7 Hb_001304_120 0.3003363788 transcription factor TF Family: WRKY WRKY protein [Hevea brasiliensis]
8 Hb_002659_030 0.3039337566 - - copper transport protein atox1, putative [Ricinus communis]
9 Hb_000364_160 0.3108033533 - - PREDICTED: uncharacterized protein LOC105639754 [Jatropha curcas]
10 Hb_000465_420 0.3120328642 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105632322 [Jatropha curcas]
11 Hb_161010_010 0.318568953 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
12 Hb_006938_050 0.3192326036 - - PREDICTED: uncharacterized protein LOC105648204 [Jatropha curcas]
13 Hb_025311_020 0.3241388416 - - PREDICTED: uncharacterized protein LOC105039527 [Elaeis guineensis]
14 Hb_173468_010 0.32723422 - - Vacuolar sorting receptor 1 precursor, putative [Ricinus communis]
15 Hb_005803_040 0.3300417816 - - PREDICTED: uncharacterized protein LOC104908276 [Beta vulgaris subsp. vulgaris]
16 Hb_018609_030 0.3309225734 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000446_060 0.334293872 - - -
18 Hb_000115_010 0.3416558721 - - 5-methyltetrahydrofolate:homocysteine methyltransferase, putative [Ricinus communis]
19 Hb_187677_010 0.344808417 - - -
20 Hb_029866_030 0.3464721551 - - hypothetical protein CICLE_v10006898mg [Citrus clementina]

Gene co-expression network

sample Hb_056199_030 Hb_056199_030 Hb_012447_010 Hb_012447_010 Hb_056199_030--Hb_012447_010 Hb_000144_040 Hb_000144_040 Hb_056199_030--Hb_000144_040 Hb_000173_440 Hb_000173_440 Hb_056199_030--Hb_000173_440 Hb_007181_020 Hb_007181_020 Hb_056199_030--Hb_007181_020 Hb_010883_130 Hb_010883_130 Hb_056199_030--Hb_010883_130 Hb_001304_120 Hb_001304_120 Hb_056199_030--Hb_001304_120 Hb_173468_010 Hb_173468_010 Hb_012447_010--Hb_173468_010 Hb_007790_040 Hb_007790_040 Hb_012447_010--Hb_007790_040 Hb_012447_010--Hb_007181_020 Hb_119504_010 Hb_119504_010 Hb_012447_010--Hb_119504_010 Hb_000465_420 Hb_000465_420 Hb_012447_010--Hb_000465_420 Hb_000144_040--Hb_001304_120 Hb_001045_110 Hb_001045_110 Hb_000144_040--Hb_001045_110 Hb_001188_120 Hb_001188_120 Hb_000144_040--Hb_001188_120 Hb_076795_010 Hb_076795_010 Hb_000144_040--Hb_076795_010 Hb_012098_190 Hb_012098_190 Hb_000144_040--Hb_012098_190 Hb_000115_010 Hb_000115_010 Hb_000173_440--Hb_000115_010 Hb_000450_150 Hb_000450_150 Hb_000173_440--Hb_000450_150 Hb_001006_220 Hb_001006_220 Hb_000173_440--Hb_001006_220 Hb_000364_160 Hb_000364_160 Hb_000173_440--Hb_000364_160 Hb_002659_030 Hb_002659_030 Hb_000173_440--Hb_002659_030 Hb_007199_010 Hb_007199_010 Hb_007181_020--Hb_007199_010 Hb_007181_020--Hb_119504_010 Hb_001780_120 Hb_001780_120 Hb_007181_020--Hb_001780_120 Hb_002078_440 Hb_002078_440 Hb_007181_020--Hb_002078_440 Hb_013893_010 Hb_013893_010 Hb_007181_020--Hb_013893_010 Hb_000856_150 Hb_000856_150 Hb_007181_020--Hb_000856_150 Hb_000764_040 Hb_000764_040 Hb_010883_130--Hb_000764_040 Hb_005803_040 Hb_005803_040 Hb_010883_130--Hb_005803_040 Hb_000307_230 Hb_000307_230 Hb_010883_130--Hb_000307_230 Hb_082987_010 Hb_082987_010 Hb_010883_130--Hb_082987_010 Hb_012295_020 Hb_012295_020 Hb_010883_130--Hb_012295_020 Hb_012071_010 Hb_012071_010 Hb_010883_130--Hb_012071_010 Hb_005007_040 Hb_005007_040 Hb_001304_120--Hb_005007_040 Hb_000065_050 Hb_000065_050 Hb_001304_120--Hb_000065_050 Hb_001304_120--Hb_012295_020 Hb_001304_120--Hb_012071_010 Hb_002092_040 Hb_002092_040 Hb_001304_120--Hb_002092_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0724145 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0682076 0.241979 0.0834465 0.134037

CAGE analysis