Hb_000101_150

Information

Type -
Description -
Location Contig101: 200087-201972
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000101_150 0.0 - - -
2 Hb_008730_010 0.162195351 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
3 Hb_170156_010 0.2486498492 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
4 Hb_076795_010 0.2631998277 - - hypothetical protein POPTR_0001s07680g, partial [Populus trichocarpa]
5 Hb_043708_010 0.2875248145 - - PREDICTED: uncharacterized protein LOC104878039 [Vitis vinifera]
6 Hb_000031_350 0.2903705969 - - PREDICTED: uncharacterized protein At1g32220, chloroplastic isoform X2 [Cucumis melo]
7 Hb_022132_020 0.3083251518 - - hypothetical protein TRIUR3_12476 [Triticum urartu]
8 Hb_000399_010 0.3126236325 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
9 Hb_166124_010 0.3172950745 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
10 Hb_106815_010 0.3209415453 - - hypothetical protein, conserved [Eimeria acervulina]
11 Hb_006113_010 0.3211508565 - - hypothetical protein VITISV_015014 [Vitis vinifera]
12 Hb_002791_020 0.3240004578 - - hypothetical protein AALP_AA5G271700 [Arabis alpina]
13 Hb_007790_040 0.3246832818 - - PREDICTED: uncharacterized protein LOC104417177 [Eucalyptus grandis]
14 Hb_000144_040 0.3262494062 - - hypothetical protein POPTR_0006s06790g [Populus trichocarpa]
15 Hb_002599_040 0.3275119261 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
16 Hb_003436_030 0.3277239045 - - plant origin recognition complex subunit, putative [Ricinus communis]
17 Hb_039262_010 0.3294284182 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
18 Hb_001545_210 0.331319404 - - hypothetical protein JCGZ_11132 [Jatropha curcas]
19 Hb_012098_190 0.3316523488 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
20 Hb_078780_010 0.3343951312 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]

Gene co-expression network

sample Hb_000101_150 Hb_000101_150 Hb_008730_010 Hb_008730_010 Hb_000101_150--Hb_008730_010 Hb_170156_010 Hb_170156_010 Hb_000101_150--Hb_170156_010 Hb_076795_010 Hb_076795_010 Hb_000101_150--Hb_076795_010 Hb_043708_010 Hb_043708_010 Hb_000101_150--Hb_043708_010 Hb_000031_350 Hb_000031_350 Hb_000101_150--Hb_000031_350 Hb_022132_020 Hb_022132_020 Hb_000101_150--Hb_022132_020 Hb_002599_040 Hb_002599_040 Hb_008730_010--Hb_002599_040 Hb_008730_010--Hb_043708_010 Hb_008730_010--Hb_076795_010 Hb_106815_010 Hb_106815_010 Hb_008730_010--Hb_106815_010 Hb_000399_010 Hb_000399_010 Hb_008730_010--Hb_000399_010 Hb_002791_020 Hb_002791_020 Hb_170156_010--Hb_002791_020 Hb_170559_010 Hb_170559_010 Hb_170156_010--Hb_170559_010 Hb_000159_020 Hb_000159_020 Hb_170156_010--Hb_000159_020 Hb_003406_030 Hb_003406_030 Hb_170156_010--Hb_003406_030 Hb_151320_010 Hb_151320_010 Hb_170156_010--Hb_151320_010 Hb_076795_010--Hb_000031_350 Hb_012098_190 Hb_012098_190 Hb_076795_010--Hb_012098_190 Hb_001188_120 Hb_001188_120 Hb_076795_010--Hb_001188_120 Hb_000144_040 Hb_000144_040 Hb_076795_010--Hb_000144_040 Hb_172388_010 Hb_172388_010 Hb_076795_010--Hb_172388_010 Hb_004650_060 Hb_004650_060 Hb_043708_010--Hb_004650_060 Hb_019656_010 Hb_019656_010 Hb_043708_010--Hb_019656_010 Hb_131102_010 Hb_131102_010 Hb_043708_010--Hb_131102_010 Hb_043708_010--Hb_002791_020 Hb_000154_010 Hb_000154_010 Hb_043708_010--Hb_000154_010 Hb_000031_350--Hb_012098_190 Hb_085083_020 Hb_085083_020 Hb_000031_350--Hb_085083_020 Hb_005439_010 Hb_005439_010 Hb_000031_350--Hb_005439_010 Hb_000031_350--Hb_001188_120 Hb_078780_010 Hb_078780_010 Hb_022132_020--Hb_078780_010 Hb_167183_010 Hb_167183_010 Hb_022132_020--Hb_167183_010 Hb_009393_070 Hb_009393_070 Hb_022132_020--Hb_009393_070 Hb_011478_010 Hb_011478_010 Hb_022132_020--Hb_011478_010 Hb_003711_030 Hb_003711_030 Hb_022132_020--Hb_003711_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.369094 0.0310191 0 0 0.330836 0.135743
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.111099 1.70269 0.180095 2.00009

CAGE analysis