Hb_153258_020

Information

Type -
Description -
Location Contig153258: 7100-7657
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_153258_020 0.0 - - -
2 Hb_001050_020 0.1848026107 - - -
3 Hb_005754_030 0.2407030636 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01203 [Jatropha curcas]
4 Hb_000920_290 0.2428307566 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
5 Hb_026698_030 0.2437384358 - - hypothetical protein CISIN_1g030953mg [Citrus sinensis]
6 Hb_007317_090 0.245007467 - - PREDICTED: glucan endo-1,3-beta-glucosidase 14 [Jatropha curcas]
7 Hb_000589_420 0.2487938154 - - PREDICTED: uncharacterized protein LOC105647273 [Jatropha curcas]
8 Hb_057796_010 0.2508349234 - - PREDICTED: uncharacterized protein LOC105801076 [Gossypium raimondii]
9 Hb_006911_020 0.26436476 - - CC-NBS-LRR protein isoform 1 [Theobroma cacao]
10 Hb_000567_240 0.2659895898 - - PREDICTED: F-box/LRR-repeat MAX2 homolog A-like [Jatropha curcas]
11 Hb_002006_060 0.2666498887 - - PREDICTED: oleosin 1-like [Jatropha curcas]
12 Hb_007735_060 0.2679540555 - - PPase [Hevea brasiliensis]
13 Hb_007897_030 0.2682321748 - - PREDICTED: serine/threonine-protein kinase-like protein CCR2 [Jatropha curcas]
14 Hb_001050_050 0.2737837018 - - PREDICTED: pentatricopeptide repeat-containing protein At5g57250, mitochondrial [Jatropha curcas]
15 Hb_000056_010 0.2761296268 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Populus euphratica]
16 Hb_000307_010 0.2772897104 - - PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Jatropha curcas]
17 Hb_167775_010 0.2778404847 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
18 Hb_000369_080 0.2812568028 - - replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis]
19 Hb_000321_120 0.2821332873 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]
20 Hb_000753_120 0.2841720598 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]

Gene co-expression network

sample Hb_153258_020 Hb_153258_020 Hb_001050_020 Hb_001050_020 Hb_153258_020--Hb_001050_020 Hb_005754_030 Hb_005754_030 Hb_153258_020--Hb_005754_030 Hb_000920_290 Hb_000920_290 Hb_153258_020--Hb_000920_290 Hb_026698_030 Hb_026698_030 Hb_153258_020--Hb_026698_030 Hb_007317_090 Hb_007317_090 Hb_153258_020--Hb_007317_090 Hb_000589_420 Hb_000589_420 Hb_153258_020--Hb_000589_420 Hb_001050_020--Hb_000920_290 Hb_001050_050 Hb_001050_050 Hb_001050_020--Hb_001050_050 Hb_004116_180 Hb_004116_180 Hb_001050_020--Hb_004116_180 Hb_001050_020--Hb_005754_030 Hb_024698_010 Hb_024698_010 Hb_001050_020--Hb_024698_010 Hb_005754_030--Hb_001050_050 Hb_002986_070 Hb_002986_070 Hb_005754_030--Hb_002986_070 Hb_007735_060 Hb_007735_060 Hb_005754_030--Hb_007735_060 Hb_002016_050 Hb_002016_050 Hb_005754_030--Hb_002016_050 Hb_015183_080 Hb_015183_080 Hb_005754_030--Hb_015183_080 Hb_007234_010 Hb_007234_010 Hb_005754_030--Hb_007234_010 Hb_000473_120 Hb_000473_120 Hb_000920_290--Hb_000473_120 Hb_000920_290--Hb_004116_180 Hb_002909_100 Hb_002909_100 Hb_000920_290--Hb_002909_100 Hb_000470_110 Hb_000470_110 Hb_000920_290--Hb_000470_110 Hb_143766_030 Hb_143766_030 Hb_000920_290--Hb_143766_030 Hb_000200_170 Hb_000200_170 Hb_000920_290--Hb_000200_170 Hb_008803_040 Hb_008803_040 Hb_026698_030--Hb_008803_040 Hb_002943_010 Hb_002943_010 Hb_026698_030--Hb_002943_010 Hb_008226_030 Hb_008226_030 Hb_026698_030--Hb_008226_030 Hb_000404_040 Hb_000404_040 Hb_026698_030--Hb_000404_040 Hb_032718_010 Hb_032718_010 Hb_026698_030--Hb_032718_010 Hb_004574_040 Hb_004574_040 Hb_026698_030--Hb_004574_040 Hb_007317_090--Hb_005754_030 Hb_000031_230 Hb_000031_230 Hb_007317_090--Hb_000031_230 Hb_000261_400 Hb_000261_400 Hb_007317_090--Hb_000261_400 Hb_007317_090--Hb_002986_070 Hb_007317_090--Hb_000589_420 Hb_006422_020 Hb_006422_020 Hb_007317_090--Hb_006422_020 Hb_000556_070 Hb_000556_070 Hb_000589_420--Hb_000556_070 Hb_167775_010 Hb_167775_010 Hb_000589_420--Hb_167775_010 Hb_000567_240 Hb_000567_240 Hb_000589_420--Hb_000567_240 Hb_006717_010 Hb_006717_010 Hb_000589_420--Hb_006717_010 Hb_000321_120 Hb_000321_120 Hb_000589_420--Hb_000321_120 Hb_003912_080 Hb_003912_080 Hb_000589_420--Hb_003912_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0616061 0.387982 0.11578 0.248412 0 0.198782
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.153137 0.036492 0.338561

CAGE analysis