Hb_009898_030

Information

Type -
Description -
Location Contig9898: 18341-20240
Sequence    

Annotation

kegg
ID pda:103720281
description uncharacterized LOC103720281
nr
ID XP_008808125.1
description PREDICTED: uncharacterized protein LOC103720281 [Phoenix dactylifera]
swissprot
ID -
description -
trembl
ID A5BSC8
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043980 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009898_030 0.0 - - PREDICTED: uncharacterized protein LOC103720281 [Phoenix dactylifera]
2 Hb_001488_280 0.1254746391 - - hypothetical protein JCGZ_19947 [Jatropha curcas]
3 Hb_002660_040 0.1285248754 - - PREDICTED: CASP-like protein 5A1 isoform X1 [Jatropha curcas]
4 Hb_002030_170 0.1550092462 - - PREDICTED: calcium-transporting ATPase 1-like [Jatropha curcas]
5 Hb_025526_080 0.164012498 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Vitis vinifera]
6 Hb_001008_110 0.1700151989 - - -
7 Hb_000120_310 0.1716630351 - - Gibberellin 3-beta-dioxygenase, putative [Ricinus communis]
8 Hb_032717_010 0.1734248833 - - unnamed protein product [Vitis vinifera]
9 Hb_000417_280 0.1753090149 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004656_010 0.175599112 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
11 Hb_004631_080 0.1760859358 - - P3B-ATPase PH1 [Petunia x hybrida]
12 Hb_002833_020 0.1767490571 desease resistance Gene Name: LRR_4 PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
13 Hb_000574_370 0.1784202531 - - PREDICTED: formamidopyrimidine-DNA glycosylase isoform X1 [Jatropha curcas]
14 Hb_006241_010 0.1799532118 desease resistance Gene Name: NB-ARC Disease resistance protein RFL1, putative [Ricinus communis]
15 Hb_000847_020 0.1832623448 - - PREDICTED: ras-related protein RABA5b [Jatropha curcas]
16 Hb_064985_010 0.1847309346 - - Leucine-rich repeat transmembrane protein kinase, putative [Theobroma cacao]
17 Hb_000723_120 0.1854578837 - - PREDICTED: UDP-glycosyltransferase 86A1 [Jatropha curcas]
18 Hb_001091_020 0.187466837 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
19 Hb_005523_050 0.1882490978 - - hypothetical protein JCGZ_09175 [Jatropha curcas]
20 Hb_001842_060 0.1887887181 desease resistance Gene Name: ABC_trans_N hypothetical protein JCGZ_10908 [Jatropha curcas]

Gene co-expression network

sample Hb_009898_030 Hb_009898_030 Hb_001488_280 Hb_001488_280 Hb_009898_030--Hb_001488_280 Hb_002660_040 Hb_002660_040 Hb_009898_030--Hb_002660_040 Hb_002030_170 Hb_002030_170 Hb_009898_030--Hb_002030_170 Hb_025526_080 Hb_025526_080 Hb_009898_030--Hb_025526_080 Hb_001008_110 Hb_001008_110 Hb_009898_030--Hb_001008_110 Hb_000120_310 Hb_000120_310 Hb_009898_030--Hb_000120_310 Hb_001488_280--Hb_000120_310 Hb_002833_020 Hb_002833_020 Hb_001488_280--Hb_002833_020 Hb_000417_280 Hb_000417_280 Hb_001488_280--Hb_000417_280 Hb_000574_370 Hb_000574_370 Hb_001488_280--Hb_000574_370 Hb_005880_010 Hb_005880_010 Hb_001488_280--Hb_005880_010 Hb_000527_140 Hb_000527_140 Hb_002660_040--Hb_000527_140 Hb_064985_010 Hb_064985_010 Hb_002660_040--Hb_064985_010 Hb_002660_040--Hb_005880_010 Hb_002660_040--Hb_002833_020 Hb_002660_040--Hb_001008_110 Hb_006241_010 Hb_006241_010 Hb_002660_040--Hb_006241_010 Hb_004631_080 Hb_004631_080 Hb_002030_170--Hb_004631_080 Hb_001842_060 Hb_001842_060 Hb_002030_170--Hb_001842_060 Hb_002030_170--Hb_002660_040 Hb_002272_230 Hb_002272_230 Hb_002030_170--Hb_002272_230 Hb_000313_370 Hb_000313_370 Hb_002030_170--Hb_000313_370 Hb_002662_090 Hb_002662_090 Hb_002030_170--Hb_002662_090 Hb_025526_080--Hb_002272_230 Hb_031042_030 Hb_031042_030 Hb_025526_080--Hb_031042_030 Hb_025526_080--Hb_004631_080 Hb_000473_070 Hb_000473_070 Hb_025526_080--Hb_000473_070 Hb_004800_220 Hb_004800_220 Hb_025526_080--Hb_004800_220 Hb_004656_010 Hb_004656_010 Hb_025526_080--Hb_004656_010 Hb_001008_110--Hb_000417_280 Hb_001008_110--Hb_002833_020 Hb_001008_110--Hb_064985_010 Hb_003142_060 Hb_003142_060 Hb_001008_110--Hb_003142_060 Hb_032717_010 Hb_032717_010 Hb_001008_110--Hb_032717_010 Hb_042202_020 Hb_042202_020 Hb_001008_110--Hb_042202_020 Hb_001856_170 Hb_001856_170 Hb_000120_310--Hb_001856_170 Hb_001369_160 Hb_001369_160 Hb_000120_310--Hb_001369_160 Hb_001596_020 Hb_001596_020 Hb_000120_310--Hb_001596_020 Hb_000120_310--Hb_002833_020 Hb_004586_240 Hb_004586_240 Hb_000120_310--Hb_004586_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0668386 0.52811 0.368491 0.257724 0.0191731 0.0912011
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0637449 0.841119 0.212685

CAGE analysis