Hb_009767_070

Information

Type -
Description -
Location Contig9767: 55794-59642
Sequence    

Annotation

kegg
ID rcu:RCOM_0912180
description hypothetical protein
nr
ID XP_012069620.1
description PREDICTED: uncharacterized protein LOC105631980 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L7W5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02167 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64116: 55846-59520
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009767_070 0.0 - - PREDICTED: uncharacterized protein LOC105631980 [Jatropha curcas]
2 Hb_153553_030 0.1017756854 - - PREDICTED: zinc finger protein GIS2 [Jatropha curcas]
3 Hb_002600_020 0.102654729 - - unnamed protein product [Vitis vinifera]
4 Hb_004312_010 0.1043710151 - - PREDICTED: serine/threonine-protein kinase At5g01020 isoform X2 [Jatropha curcas]
5 Hb_000951_100 0.1044595174 - - PREDICTED: uncharacterized protein LOC103436565 isoform X1 [Malus domestica]
6 Hb_006615_050 0.1054856415 - - PREDICTED: uncharacterized protein LOC105640686 [Jatropha curcas]
7 Hb_000081_010 0.1076553549 - - hypothetical protein B456_012G056000 [Gossypium raimondii]
8 Hb_000173_310 0.1093569837 - - PREDICTED: uncharacterized protein LOC105631893 isoform X1 [Jatropha curcas]
9 Hb_000959_230 0.1105847107 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A [Populus euphratica]
10 Hb_000359_040 0.1106206275 - - conserved hypothetical protein [Ricinus communis]
11 Hb_003213_010 0.1124099063 - - PREDICTED: uncharacterized protein LOC105641815 [Jatropha curcas]
12 Hb_001804_110 0.1146088455 - - hypothetical protein CISIN_1g031200mg [Citrus sinensis]
13 Hb_002163_050 0.1159937016 - - hypothetical protein POPTR_0014s15490g [Populus trichocarpa]
14 Hb_004096_180 0.1167861602 - - PREDICTED: 14-3-3-like protein A [Jatropha curcas]
15 Hb_014720_120 0.1168581482 - - Phosphoenolpyruvate/phosphate translocator 1, chloroplastic -like protein [Gossypium arboreum]
16 Hb_001140_270 0.11710314 - - hypothetical protein EUGRSUZ_E00166 [Eucalyptus grandis]
17 Hb_032202_140 0.1171838317 - - PREDICTED: flap endonuclease GEN-like 1 [Jatropha curcas]
18 Hb_001456_060 0.1172943859 - - hypothetical protein JCGZ_17090 [Jatropha curcas]
19 Hb_000086_170 0.1174786577 - - PREDICTED: serine/threonine-protein kinase 19 [Jatropha curcas]
20 Hb_007441_110 0.119211172 - - PREDICTED: F-box/LRR-repeat protein At3g58900-like [Jatropha curcas]

Gene co-expression network

sample Hb_009767_070 Hb_009767_070 Hb_153553_030 Hb_153553_030 Hb_009767_070--Hb_153553_030 Hb_002600_020 Hb_002600_020 Hb_009767_070--Hb_002600_020 Hb_004312_010 Hb_004312_010 Hb_009767_070--Hb_004312_010 Hb_000951_100 Hb_000951_100 Hb_009767_070--Hb_000951_100 Hb_006615_050 Hb_006615_050 Hb_009767_070--Hb_006615_050 Hb_000081_010 Hb_000081_010 Hb_009767_070--Hb_000081_010 Hb_003621_020 Hb_003621_020 Hb_153553_030--Hb_003621_020 Hb_153553_030--Hb_002600_020 Hb_005588_030 Hb_005588_030 Hb_153553_030--Hb_005588_030 Hb_000866_410 Hb_000866_410 Hb_153553_030--Hb_000866_410 Hb_000638_290 Hb_000638_290 Hb_153553_030--Hb_000638_290 Hb_000009_530 Hb_000009_530 Hb_153553_030--Hb_000009_530 Hb_032202_140 Hb_032202_140 Hb_002600_020--Hb_032202_140 Hb_000181_110 Hb_000181_110 Hb_002600_020--Hb_000181_110 Hb_002530_030 Hb_002530_030 Hb_002600_020--Hb_002530_030 Hb_001163_050 Hb_001163_050 Hb_002600_020--Hb_001163_050 Hb_000684_380 Hb_000684_380 Hb_002600_020--Hb_000684_380 Hb_006132_110 Hb_006132_110 Hb_004312_010--Hb_006132_110 Hb_000300_260 Hb_000300_260 Hb_004312_010--Hb_000300_260 Hb_000086_170 Hb_000086_170 Hb_004312_010--Hb_000086_170 Hb_000173_310 Hb_000173_310 Hb_004312_010--Hb_000173_310 Hb_004312_010--Hb_006615_050 Hb_003213_010 Hb_003213_010 Hb_004312_010--Hb_003213_010 Hb_000169_080 Hb_000169_080 Hb_000951_100--Hb_000169_080 Hb_000951_100--Hb_000081_010 Hb_001124_010 Hb_001124_010 Hb_000951_100--Hb_001124_010 Hb_005194_020 Hb_005194_020 Hb_000951_100--Hb_005194_020 Hb_004096_180 Hb_004096_180 Hb_000951_100--Hb_004096_180 Hb_011671_310 Hb_011671_310 Hb_000951_100--Hb_011671_310 Hb_004807_020 Hb_004807_020 Hb_006615_050--Hb_004807_020 Hb_001077_070 Hb_001077_070 Hb_006615_050--Hb_001077_070 Hb_171900_090 Hb_171900_090 Hb_006615_050--Hb_171900_090 Hb_007007_040 Hb_007007_040 Hb_006615_050--Hb_007007_040 Hb_000789_320 Hb_000789_320 Hb_006615_050--Hb_000789_320 Hb_000081_010--Hb_004096_180 Hb_002872_030 Hb_002872_030 Hb_000081_010--Hb_002872_030 Hb_006588_070 Hb_006588_070 Hb_000081_010--Hb_006588_070 Hb_073973_130 Hb_073973_130 Hb_000081_010--Hb_073973_130 Hb_000076_160 Hb_000076_160 Hb_000081_010--Hb_000076_160 Hb_014361_150 Hb_014361_150 Hb_000081_010--Hb_014361_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.54551 13.7991 23.9823 12.2799 15.6698 12.8047
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.93238 17.2963 12.3205 7.367 6.91719

CAGE analysis