Hb_001124_010

Information

Type -
Description -
Location Contig1124: 14356-17492
Sequence    

Annotation

kegg
ID rcu:RCOM_1312940
description kinase, putative (EC:2.7.11.25)
nr
ID XP_012086648.1
description PREDICTED: serine/threonine-protein kinase WNK8 isoform X2 [Jatropha curcas]
swissprot
ID Q944Q0
description Serine/threonine-protein kinase WNK8 OS=Arabidopsis thaliana GN=WNK8 PE=1 SV=1
trembl
ID A0A067JZ30
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20391 PE=4 SV=1
Gene Ontology
ID GO:0005622
description kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03786: 14210-17489
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001124_010 0.0 - - PREDICTED: serine/threonine-protein kinase WNK8 isoform X2 [Jatropha curcas]
2 Hb_016467_010 0.0698230614 - - hypothetical protein POPTR_0004s18340g [Populus trichocarpa]
3 Hb_012395_170 0.0811992266 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001761_120 0.0835986924 - - hypothetical protein JCGZ_22564 [Jatropha curcas]
5 Hb_002073_200 0.0843405738 - - Phosphatase 2A-2 [Theobroma cacao]
6 Hb_084247_010 0.0881842678 - - conserved hypothetical protein [Ricinus communis]
7 Hb_164010_040 0.0897488084 - - serine/threonine protein kinase, putative [Ricinus communis]
8 Hb_004162_130 0.0903182783 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002754_010 0.0924321016 - - PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
10 Hb_138585_090 0.093651466 - - Long chain base2 isoform 2 [Theobroma cacao]
11 Hb_003531_080 0.0941211832 - - PREDICTED: small G protein signaling modulator 2 isoform X1 [Jatropha curcas]
12 Hb_004312_010 0.0950301447 - - PREDICTED: serine/threonine-protein kinase At5g01020 isoform X2 [Jatropha curcas]
13 Hb_004052_080 0.095994298 - - conserved hypothetical protein [Ricinus communis]
14 Hb_154471_020 0.0970088208 - - squalene synthetase [Euphorbia tirucalli]
15 Hb_000567_190 0.0977919223 - - PREDICTED: protein SCAR3 isoform X2 [Jatropha curcas]
16 Hb_013358_040 0.0981133233 - - PREDICTED: stromal cell-derived factor 2-like protein [Jatropha curcas]
17 Hb_000951_100 0.1002326081 - - PREDICTED: uncharacterized protein LOC103436565 isoform X1 [Malus domestica]
18 Hb_000300_500 0.1002951447 - - PREDICTED: uncharacterized protein LOC105632604 [Jatropha curcas]
19 Hb_062226_130 0.1012801751 - - PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Jatropha curcas]
20 Hb_004096_180 0.1021390936 - - PREDICTED: 14-3-3-like protein A [Jatropha curcas]

Gene co-expression network

sample Hb_001124_010 Hb_001124_010 Hb_016467_010 Hb_016467_010 Hb_001124_010--Hb_016467_010 Hb_012395_170 Hb_012395_170 Hb_001124_010--Hb_012395_170 Hb_001761_120 Hb_001761_120 Hb_001124_010--Hb_001761_120 Hb_002073_200 Hb_002073_200 Hb_001124_010--Hb_002073_200 Hb_084247_010 Hb_084247_010 Hb_001124_010--Hb_084247_010 Hb_164010_040 Hb_164010_040 Hb_001124_010--Hb_164010_040 Hb_006132_110 Hb_006132_110 Hb_016467_010--Hb_006132_110 Hb_004312_010 Hb_004312_010 Hb_016467_010--Hb_004312_010 Hb_027428_010 Hb_027428_010 Hb_016467_010--Hb_027428_010 Hb_000649_230 Hb_000649_230 Hb_016467_010--Hb_000649_230 Hb_000046_040 Hb_000046_040 Hb_016467_010--Hb_000046_040 Hb_005276_060 Hb_005276_060 Hb_012395_170--Hb_005276_060 Hb_012395_170--Hb_084247_010 Hb_003617_020 Hb_003617_020 Hb_012395_170--Hb_003617_020 Hb_003929_170 Hb_003929_170 Hb_012395_170--Hb_003929_170 Hb_000390_250 Hb_000390_250 Hb_012395_170--Hb_000390_250 Hb_170416_010 Hb_170416_010 Hb_001761_120--Hb_170416_010 Hb_003531_080 Hb_003531_080 Hb_001761_120--Hb_003531_080 Hb_007290_030 Hb_007290_030 Hb_001761_120--Hb_007290_030 Hb_004052_080 Hb_004052_080 Hb_001761_120--Hb_004052_080 Hb_000339_040 Hb_000339_040 Hb_001761_120--Hb_000339_040 Hb_000103_340 Hb_000103_340 Hb_001761_120--Hb_000103_340 Hb_000868_110 Hb_000868_110 Hb_002073_200--Hb_000868_110 Hb_013358_040 Hb_013358_040 Hb_002073_200--Hb_013358_040 Hb_000025_730 Hb_000025_730 Hb_002073_200--Hb_000025_730 Hb_000738_020 Hb_000738_020 Hb_002073_200--Hb_000738_020 Hb_002073_200--Hb_164010_040 Hb_095296_010 Hb_095296_010 Hb_002073_200--Hb_095296_010 Hb_084247_010--Hb_005276_060 Hb_005162_090 Hb_005162_090 Hb_084247_010--Hb_005162_090 Hb_003929_070 Hb_003929_070 Hb_084247_010--Hb_003929_070 Hb_013575_010 Hb_013575_010 Hb_084247_010--Hb_013575_010 Hb_002754_010 Hb_002754_010 Hb_164010_040--Hb_002754_010 Hb_000869_080 Hb_000869_080 Hb_164010_040--Hb_000869_080 Hb_062226_130 Hb_062226_130 Hb_164010_040--Hb_062226_130 Hb_164010_040--Hb_013358_040 Hb_001278_100 Hb_001278_100 Hb_164010_040--Hb_001278_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.0271 14.0545 21.8758 18.803 10.1605 13.544
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.47081 16.7012 17.4408 6.49228 11.2384

CAGE analysis