Hb_000868_110

Information

Type -
Description -
Location Contig868: 181983-186394
Sequence    

Annotation

kegg
ID pmum:103340641
description uncharacterized LOC103340641
nr
ID XP_012077124.1
description PREDICTED: uncharacterized protein LOC105638026 [Jatropha curcas]
swissprot
ID Q9URW6
description SH3 domain-containing protein PJ696.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPJ696.02 PE=1 SV=1
trembl
ID A0A067KCV5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07543 PE=4 SV=1
Gene Ontology
ID GO:0046872
description sh3 domain-containing protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61053: 183142-183421
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000868_110 0.0 - - PREDICTED: uncharacterized protein LOC105638026 [Jatropha curcas]
2 Hb_095296_010 0.0362758562 - - PREDICTED: syntaxin-32 [Jatropha curcas]
3 Hb_002073_200 0.051222627 - - Phosphatase 2A-2 [Theobroma cacao]
4 Hb_164010_040 0.0657605065 - - serine/threonine protein kinase, putative [Ricinus communis]
5 Hb_003001_080 0.0697585473 - - PREDICTED: uncharacterized protein LOC105644363 [Jatropha curcas]
6 Hb_021576_110 0.0698529266 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 4 [Jatropha curcas]
7 Hb_000869_080 0.0737370895 - - PREDICTED: uncharacterized protein LOC105641084 isoform X2 [Jatropha curcas]
8 Hb_000331_670 0.0739435603 - - PREDICTED: protein tipD [Jatropha curcas]
9 Hb_002740_030 0.074980207 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
10 Hb_000661_290 0.0758166609 - - PREDICTED: NAD(H) kinase 1-like isoform X1 [Populus euphratica]
11 Hb_013358_040 0.0778996537 - - PREDICTED: stromal cell-derived factor 2-like protein [Jatropha curcas]
12 Hb_006588_210 0.0795104755 - - PREDICTED: E3 ubiquitin-protein ligase Hakai [Jatropha curcas]
13 Hb_000049_260 0.0807046078 - - WD-repeat protein, putative [Ricinus communis]
14 Hb_006816_350 0.080948521 - - PREDICTED: syntaxin-43 [Jatropha curcas]
15 Hb_001163_050 0.0809748975 - - PREDICTED: histone deacetylase 9 [Jatropha curcas]
16 Hb_000563_320 0.0810946899 - - PREDICTED: induced during hyphae development protein 1 [Jatropha curcas]
17 Hb_000220_010 0.0813847931 - - PREDICTED: uncharacterized protein LOC105630083 [Jatropha curcas]
18 Hb_000705_170 0.0814610503 - - PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Jatropha curcas]
19 Hb_005541_010 0.0817421408 - - PREDICTED: uncharacterized protein LOC105629250 [Jatropha curcas]
20 Hb_004208_030 0.0829470411 transcription factor TF Family: MYB-related PREDICTED: TSL-kinase interacting protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000868_110 Hb_000868_110 Hb_095296_010 Hb_095296_010 Hb_000868_110--Hb_095296_010 Hb_002073_200 Hb_002073_200 Hb_000868_110--Hb_002073_200 Hb_164010_040 Hb_164010_040 Hb_000868_110--Hb_164010_040 Hb_003001_080 Hb_003001_080 Hb_000868_110--Hb_003001_080 Hb_021576_110 Hb_021576_110 Hb_000868_110--Hb_021576_110 Hb_000869_080 Hb_000869_080 Hb_000868_110--Hb_000869_080 Hb_095296_010--Hb_002073_200 Hb_005116_060 Hb_005116_060 Hb_095296_010--Hb_005116_060 Hb_003020_270 Hb_003020_270 Hb_095296_010--Hb_003020_270 Hb_006816_350 Hb_006816_350 Hb_095296_010--Hb_006816_350 Hb_095296_010--Hb_000869_080 Hb_013358_040 Hb_013358_040 Hb_002073_200--Hb_013358_040 Hb_000025_730 Hb_000025_730 Hb_002073_200--Hb_000025_730 Hb_000738_020 Hb_000738_020 Hb_002073_200--Hb_000738_020 Hb_002073_200--Hb_164010_040 Hb_002754_010 Hb_002754_010 Hb_164010_040--Hb_002754_010 Hb_164010_040--Hb_000869_080 Hb_062226_130 Hb_062226_130 Hb_164010_040--Hb_062226_130 Hb_164010_040--Hb_013358_040 Hb_001278_100 Hb_001278_100 Hb_164010_040--Hb_001278_100 Hb_001163_050 Hb_001163_050 Hb_003001_080--Hb_001163_050 Hb_000340_400 Hb_000340_400 Hb_003001_080--Hb_000340_400 Hb_152175_010 Hb_152175_010 Hb_003001_080--Hb_152175_010 Hb_008453_140 Hb_008453_140 Hb_003001_080--Hb_008453_140 Hb_004837_180 Hb_004837_180 Hb_003001_080--Hb_004837_180 Hb_032202_140 Hb_032202_140 Hb_003001_080--Hb_032202_140 Hb_000331_670 Hb_000331_670 Hb_021576_110--Hb_000331_670 Hb_140506_010 Hb_140506_010 Hb_021576_110--Hb_140506_010 Hb_001818_070 Hb_001818_070 Hb_021576_110--Hb_001818_070 Hb_001157_040 Hb_001157_040 Hb_021576_110--Hb_001157_040 Hb_001838_060 Hb_001838_060 Hb_021576_110--Hb_001838_060 Hb_000729_030 Hb_000729_030 Hb_000869_080--Hb_000729_030 Hb_000869_080--Hb_013358_040 Hb_000869_080--Hb_000738_020 Hb_005162_090 Hb_005162_090 Hb_000869_080--Hb_005162_090 Hb_000869_080--Hb_002073_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.39616 9.67123 7.54304 6.86183 6.63799 6.51917
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.04112 9.98766 7.4719 3.97132 4.27199

CAGE analysis