Hb_000340_400

Information

Type -
Description -
Location Contig340: 340197-344352
Sequence    

Annotation

kegg
ID rcu:RCOM_0647010
description Histidine-containing phosphotransfer protein, putative (EC:1.3.1.74)
nr
ID XP_002524774.1
description Histidine-containing phosphotransfer protein, putative [Ricinus communis]
swissprot
ID Q8L9T7
description Histidine-containing phosphotransfer protein 5 OS=Arabidopsis thaliana GN=AHP5 PE=1 SV=2
trembl
ID B9SFK5
description Histidine-containing phosphotransfer protein, putative OS=Ricinus communis GN=RCOM_0647010 PE=4 SV=1
Gene Ontology
ID GO:0005622
description histidine-containing phosphotransfer protein 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35576: 340323-344306
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000340_400 0.0 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
2 Hb_004837_180 0.0563763873 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Jatropha curcas]
3 Hb_005116_060 0.0566869657 - - PREDICTED: mitochondrial Rho GTPase 2 isoform X1 [Jatropha curcas]
4 Hb_003001_080 0.0612904479 - - PREDICTED: uncharacterized protein LOC105644363 [Jatropha curcas]
5 Hb_006478_040 0.063344183 - - PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial [Jatropha curcas]
6 Hb_007035_050 0.0653396427 - - PREDICTED: cleavage stimulating factor 64 [Jatropha curcas]
7 Hb_001359_050 0.0714723541 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000563_230 0.0720809275 - - phospholipase d zeta, putative [Ricinus communis]
9 Hb_002217_110 0.0731558265 - - PREDICTED: craniofacial development protein 1 [Jatropha curcas]
10 Hb_001225_040 0.0747372107 - - PREDICTED: meiosis-specific nuclear structural protein 1 isoform X5 [Jatropha curcas]
11 Hb_003030_060 0.0752369555 - - PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 2-like [Jatropha curcas]
12 Hb_006588_210 0.0753752024 - - PREDICTED: E3 ubiquitin-protein ligase Hakai [Jatropha curcas]
13 Hb_001723_020 0.0760940294 - - PREDICTED: nuclear export mediator factor Nemf [Jatropha curcas]
14 Hb_001470_030 0.0771465922 - - PREDICTED: MORC family CW-type zinc finger protein 3 isoform X2 [Jatropha curcas]
15 Hb_007590_020 0.0776695822 - - PREDICTED: protein DAMAGED DNA-BINDING 2 [Jatropha curcas]
16 Hb_003464_090 0.0779944482 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105642342 [Jatropha curcas]
17 Hb_000886_050 0.0782486953 - - hypothetical protein POPTR_0003s01110g [Populus trichocarpa]
18 Hb_001720_040 0.07912622 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000175_100 0.0794413095 - - protein kinase, putative [Ricinus communis]
20 Hb_003849_110 0.0808003409 - - hypothetical protein JCGZ_17842 [Jatropha curcas]

Gene co-expression network

sample Hb_000340_400 Hb_000340_400 Hb_004837_180 Hb_004837_180 Hb_000340_400--Hb_004837_180 Hb_005116_060 Hb_005116_060 Hb_000340_400--Hb_005116_060 Hb_003001_080 Hb_003001_080 Hb_000340_400--Hb_003001_080 Hb_006478_040 Hb_006478_040 Hb_000340_400--Hb_006478_040 Hb_007035_050 Hb_007035_050 Hb_000340_400--Hb_007035_050 Hb_001359_050 Hb_001359_050 Hb_000340_400--Hb_001359_050 Hb_005867_070 Hb_005867_070 Hb_004837_180--Hb_005867_070 Hb_007590_020 Hb_007590_020 Hb_004837_180--Hb_007590_020 Hb_003929_280 Hb_003929_280 Hb_004837_180--Hb_003929_280 Hb_001225_040 Hb_001225_040 Hb_004837_180--Hb_001225_040 Hb_002217_110 Hb_002217_110 Hb_004837_180--Hb_002217_110 Hb_004236_050 Hb_004236_050 Hb_004837_180--Hb_004236_050 Hb_005116_060--Hb_007035_050 Hb_095296_010 Hb_095296_010 Hb_005116_060--Hb_095296_010 Hb_005116_060--Hb_006478_040 Hb_001030_020 Hb_001030_020 Hb_005116_060--Hb_001030_020 Hb_005116_060--Hb_003001_080 Hb_001163_050 Hb_001163_050 Hb_003001_080--Hb_001163_050 Hb_152175_010 Hb_152175_010 Hb_003001_080--Hb_152175_010 Hb_008453_140 Hb_008453_140 Hb_003001_080--Hb_008453_140 Hb_003001_080--Hb_004837_180 Hb_032202_140 Hb_032202_140 Hb_003001_080--Hb_032202_140 Hb_001546_080 Hb_001546_080 Hb_006478_040--Hb_001546_080 Hb_003030_060 Hb_003030_060 Hb_006478_040--Hb_003030_060 Hb_000318_250 Hb_000318_250 Hb_006478_040--Hb_000318_250 Hb_001470_030 Hb_001470_030 Hb_006478_040--Hb_001470_030 Hb_001396_200 Hb_001396_200 Hb_007035_050--Hb_001396_200 Hb_007035_050--Hb_000318_250 Hb_000886_050 Hb_000886_050 Hb_007035_050--Hb_000886_050 Hb_007765_110 Hb_007765_110 Hb_007035_050--Hb_007765_110 Hb_024958_010 Hb_024958_010 Hb_001359_050--Hb_024958_010 Hb_008725_230 Hb_008725_230 Hb_001359_050--Hb_008725_230 Hb_001221_110 Hb_001221_110 Hb_001359_050--Hb_001221_110 Hb_006570_080 Hb_006570_080 Hb_001359_050--Hb_006570_080 Hb_003464_090 Hb_003464_090 Hb_001359_050--Hb_003464_090 Hb_000173_280 Hb_000173_280 Hb_001359_050--Hb_000173_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.9318 34.1364 26.9407 17.8559 22.4921 19.9467
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
24.9119 33.5166 15.8596 22.8353 19.4496

CAGE analysis