Hb_000729_030

Information

Type -
Description -
Location Contig729: 68369-71433
Sequence    

Annotation

kegg
ID gmx:100781730
description uncharacterized LOC100781730
nr
ID XP_012072765.1
description PREDICTED: dentin sialophosphoprotein [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L0J0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06957 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55884: 68432-71363
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000729_030 0.0 - - PREDICTED: dentin sialophosphoprotein [Jatropha curcas]
2 Hb_000869_080 0.0509662397 - - PREDICTED: uncharacterized protein LOC105641084 isoform X2 [Jatropha curcas]
3 Hb_000261_020 0.0551114492 - - PREDICTED: chaperone protein dnaJ 20, chloroplastic [Jatropha curcas]
4 Hb_000336_150 0.055556355 - - ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
5 Hb_013358_040 0.0713398133 - - PREDICTED: stromal cell-derived factor 2-like protein [Jatropha curcas]
6 Hb_003124_150 0.0727275705 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 28-like [Jatropha curcas]
7 Hb_010368_010 0.0730878612 - - RNA splicing protein mrs2, mitochondrial, putative [Ricinus communis]
8 Hb_001470_030 0.0758497219 - - PREDICTED: MORC family CW-type zinc finger protein 3 isoform X2 [Jatropha curcas]
9 Hb_000221_190 0.0762546646 - - PREDICTED: 14-3-3-like protein [Jatropha curcas]
10 Hb_001766_060 0.0783779843 - - conserved hypothetical protein [Ricinus communis]
11 Hb_003001_080 0.0785811011 - - PREDICTED: uncharacterized protein LOC105644363 [Jatropha curcas]
12 Hb_019280_050 0.0788436903 - - PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 [Jatropha curcas]
13 Hb_001163_050 0.0788552673 - - PREDICTED: histone deacetylase 9 [Jatropha curcas]
14 Hb_000614_160 0.0789594487 - - PREDICTED: pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Jatropha curcas]
15 Hb_003582_060 0.0790083032 transcription factor TF Family: BBR-BPC PREDICTED: protein BASIC PENTACYSTEINE2-like isoform X1 [Jatropha curcas]
16 Hb_003151_040 0.0799731949 transcription factor TF Family: Alfin-like zinc finger family protein [Populus trichocarpa]
17 Hb_000373_070 0.0810452281 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X2 [Jatropha curcas]
18 Hb_003052_190 0.0813566298 - - PREDICTED: uncharacterized protein LOC105641937 isoform X2 [Jatropha curcas]
19 Hb_000310_020 0.0814335345 - - hypothetical protein JCGZ_20797 [Jatropha curcas]
20 Hb_164010_040 0.0837118254 - - serine/threonine protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000729_030 Hb_000729_030 Hb_000869_080 Hb_000869_080 Hb_000729_030--Hb_000869_080 Hb_000261_020 Hb_000261_020 Hb_000729_030--Hb_000261_020 Hb_000336_150 Hb_000336_150 Hb_000729_030--Hb_000336_150 Hb_013358_040 Hb_013358_040 Hb_000729_030--Hb_013358_040 Hb_003124_150 Hb_003124_150 Hb_000729_030--Hb_003124_150 Hb_010368_010 Hb_010368_010 Hb_000729_030--Hb_010368_010 Hb_164010_040 Hb_164010_040 Hb_000869_080--Hb_164010_040 Hb_000869_080--Hb_013358_040 Hb_000738_020 Hb_000738_020 Hb_000869_080--Hb_000738_020 Hb_005162_090 Hb_005162_090 Hb_000869_080--Hb_005162_090 Hb_002073_200 Hb_002073_200 Hb_000869_080--Hb_002073_200 Hb_000053_110 Hb_000053_110 Hb_000261_020--Hb_000053_110 Hb_028697_010 Hb_028697_010 Hb_000261_020--Hb_028697_010 Hb_003647_140 Hb_003647_140 Hb_000261_020--Hb_003647_140 Hb_000614_160 Hb_000614_160 Hb_000261_020--Hb_000614_160 Hb_000976_120 Hb_000976_120 Hb_000261_020--Hb_000976_120 Hb_007304_120 Hb_007304_120 Hb_000336_150--Hb_007304_120 Hb_006615_240 Hb_006615_240 Hb_000336_150--Hb_006615_240 Hb_003582_060 Hb_003582_060 Hb_000336_150--Hb_003582_060 Hb_000205_090 Hb_000205_090 Hb_000336_150--Hb_000205_090 Hb_004109_170 Hb_004109_170 Hb_000336_150--Hb_004109_170 Hb_000069_310 Hb_000069_310 Hb_013358_040--Hb_000069_310 Hb_000915_180 Hb_000915_180 Hb_013358_040--Hb_000915_180 Hb_013358_040--Hb_164010_040 Hb_013358_040--Hb_002073_200 Hb_003428_010 Hb_003428_010 Hb_013358_040--Hb_003428_010 Hb_000310_020 Hb_000310_020 Hb_003124_150--Hb_000310_020 Hb_000928_070 Hb_000928_070 Hb_003124_150--Hb_000928_070 Hb_000505_130 Hb_000505_130 Hb_003124_150--Hb_000505_130 Hb_003124_150--Hb_000336_150 Hb_000580_020 Hb_000580_020 Hb_003124_150--Hb_000580_020 Hb_010368_010--Hb_013358_040 Hb_008013_050 Hb_008013_050 Hb_010368_010--Hb_008013_050 Hb_000699_030 Hb_000699_030 Hb_010368_010--Hb_000699_030 Hb_010368_010--Hb_000336_150 Hb_000069_380 Hb_000069_380 Hb_010368_010--Hb_000069_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.1109 18.2483 19.6601 15.1883 11.9777 12.9119
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.1255 27.5883 17.6391 10.4717 17.8206

CAGE analysis