Hb_007747_060

Information

Type -
Description -
Location Contig7747: 48544-52372
Sequence    

Annotation

kegg
ID tcc:TCM_022704
description Mitochondrial fission protein isoform 1
nr
ID XP_012074403.1
description PREDICTED: mitochondrial fission protein ELM1 isoform X1 [Jatropha curcas]
swissprot
ID Q93YN4
description Mitochondrial fission protein ELM1 OS=Arabidopsis thaliana GN=ELM1 PE=1 SV=1
trembl
ID A0A067KIY9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08835 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57738: 49732-51076 , PASA_asmbl_57739: 50620-50823
cDNA
(Sanger)
(ID:Location)		 019_F03r.ab1: 42945-48349

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007747_060 0.0 - - PREDICTED: mitochondrial fission protein ELM1 isoform X1 [Jatropha curcas]
2 Hb_007803_010 0.0894989762 - - PREDICTED: F-box protein At3g07870-like [Jatropha curcas]
3 Hb_000211_110 0.0974993174 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Jatropha curcas]
4 Hb_003126_040 0.1011862312 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001541_260 0.1062643182 - - PREDICTED: protein MAK16 homolog [Jatropha curcas]
6 Hb_003752_080 0.1072323191 - - PREDICTED: ubiquitin-like-conjugating enzyme ATG10 isoform X1 [Jatropha curcas]
7 Hb_000358_250 0.1077251929 - - PREDICTED: cell division cycle protein 27 homolog B [Jatropha curcas]
8 Hb_004701_030 0.1084255621 - - hypothetical protein POPTR_0015s00420g [Populus trichocarpa]
9 Hb_011848_010 0.1084976169 - - PREDICTED: 40S ribosomal protein S4-3 [Jatropha curcas]
10 Hb_003849_060 0.1086126622 - - PREDICTED: pentatricopeptide repeat-containing protein At1g13040, mitochondrial [Jatropha curcas]
11 Hb_005895_040 0.1121812222 - - PREDICTED: tRNA threonylcarbamoyladenosine dehydratase [Jatropha curcas]
12 Hb_002687_140 0.112186805 - - hypothetical protein JCGZ_24463 [Jatropha curcas]
13 Hb_000290_020 0.1127724722 - - PREDICTED: eukaryotic translation initiation factor 3 subunit K-like isoform X2 [Populus euphratica]
14 Hb_004374_150 0.1138672727 - - PREDICTED: uncharacterized protein LOC105650290 isoform X1 [Jatropha curcas]
15 Hb_023001_020 0.11456208 - - PREDICTED: mitochondrial succinate-fumarate transporter 1 [Jatropha curcas]
16 Hb_003788_050 0.1150585581 - - PREDICTED: interferon-induced guanylate-binding protein 2-like [Jatropha curcas]
17 Hb_003849_250 0.1165878045 - - PREDICTED: protein MAK16 homolog [Jatropha curcas]
18 Hb_144787_030 0.117046325 - - PREDICTED: protein SLOW GREEN 1, chloroplastic [Jatropha curcas]
19 Hb_004656_060 0.1209873746 - - PREDICTED: uncharacterized protein LOC105634581 [Jatropha curcas]
20 Hb_004976_020 0.1211316488 - - PREDICTED: probable nucleolar protein 5-1 [Jatropha curcas]

Gene co-expression network

sample Hb_007747_060 Hb_007747_060 Hb_007803_010 Hb_007803_010 Hb_007747_060--Hb_007803_010 Hb_000211_110 Hb_000211_110 Hb_007747_060--Hb_000211_110 Hb_003126_040 Hb_003126_040 Hb_007747_060--Hb_003126_040 Hb_001541_260 Hb_001541_260 Hb_007747_060--Hb_001541_260 Hb_003752_080 Hb_003752_080 Hb_007747_060--Hb_003752_080 Hb_000358_250 Hb_000358_250 Hb_007747_060--Hb_000358_250 Hb_003073_200 Hb_003073_200 Hb_007803_010--Hb_003073_200 Hb_000421_070 Hb_000421_070 Hb_007803_010--Hb_000421_070 Hb_000008_330 Hb_000008_330 Hb_007803_010--Hb_000008_330 Hb_002081_130 Hb_002081_130 Hb_007803_010--Hb_002081_130 Hb_003464_110 Hb_003464_110 Hb_007803_010--Hb_003464_110 Hb_001894_030 Hb_001894_030 Hb_000211_110--Hb_001894_030 Hb_001357_380 Hb_001357_380 Hb_000211_110--Hb_001357_380 Hb_000920_280 Hb_000920_280 Hb_000211_110--Hb_000920_280 Hb_000640_020 Hb_000640_020 Hb_000211_110--Hb_000640_020 Hb_011848_010 Hb_011848_010 Hb_000211_110--Hb_011848_010 Hb_000059_140 Hb_000059_140 Hb_000211_110--Hb_000059_140 Hb_000290_020 Hb_000290_020 Hb_003126_040--Hb_000290_020 Hb_012675_090 Hb_012675_090 Hb_003126_040--Hb_012675_090 Hb_004525_100 Hb_004525_100 Hb_003126_040--Hb_004525_100 Hb_004044_020 Hb_004044_020 Hb_003126_040--Hb_004044_020 Hb_003086_070 Hb_003086_070 Hb_003126_040--Hb_003086_070 Hb_000088_200 Hb_000088_200 Hb_003126_040--Hb_000088_200 Hb_144787_030 Hb_144787_030 Hb_001541_260--Hb_144787_030 Hb_000236_100 Hb_000236_100 Hb_001541_260--Hb_000236_100 Hb_000139_250 Hb_000139_250 Hb_001541_260--Hb_000139_250 Hb_000465_470 Hb_000465_470 Hb_001541_260--Hb_000465_470 Hb_000032_490 Hb_000032_490 Hb_001541_260--Hb_000032_490 Hb_000946_120 Hb_000946_120 Hb_001541_260--Hb_000946_120 Hb_002233_150 Hb_002233_150 Hb_003752_080--Hb_002233_150 Hb_002687_140 Hb_002687_140 Hb_003752_080--Hb_002687_140 Hb_001348_070 Hb_001348_070 Hb_003752_080--Hb_001348_070 Hb_001047_100 Hb_001047_100 Hb_003752_080--Hb_001047_100 Hb_002495_070 Hb_002495_070 Hb_003752_080--Hb_002495_070 Hb_001405_120 Hb_001405_120 Hb_003752_080--Hb_001405_120 Hb_002477_130 Hb_002477_130 Hb_000358_250--Hb_002477_130 Hb_031939_010 Hb_031939_010 Hb_000358_250--Hb_031939_010 Hb_000116_180 Hb_000116_180 Hb_000358_250--Hb_000116_180 Hb_000538_100 Hb_000538_100 Hb_000358_250--Hb_000538_100 Hb_000429_200 Hb_000429_200 Hb_000358_250--Hb_000429_200 Hb_003849_250 Hb_003849_250 Hb_000358_250--Hb_003849_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.11621 1.54125 1.36973 0.462091 4.60871 2.85476
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.78887 2.32708 0.78185 1.34458 0.514816

CAGE analysis