Hb_001541_260

Information

Type -
Description -
Location Contig1541: 238856-242727
Sequence    

Annotation

kegg
ID rcu:RCOM_1797950
description maintenance of killer 16 (mak16) protein, putative
nr
ID XP_012085486.1
description PREDICTED: protein MAK16 homolog [Jatropha curcas]
swissprot
ID Q7ZYG5
description Protein MAK16 homolog B OS=Xenopus laevis GN=mak16-b PE=2 SV=1
trembl
ID A0A067JRZ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17820 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001541_260 0.0 - - PREDICTED: protein MAK16 homolog [Jatropha curcas]
2 Hb_144787_030 0.05881462 - - PREDICTED: protein SLOW GREEN 1, chloroplastic [Jatropha curcas]
3 Hb_000236_100 0.0645865562 - - Dynein alpha chain, flagellar outer arm [Gossypium arboreum]
4 Hb_000139_250 0.0686460042 - - PREDICTED: putative methyltransferase C9orf114 [Jatropha curcas]
5 Hb_000465_470 0.0721124341 - - unknown [Picea sitchensis]
6 Hb_000032_490 0.0730335244 - - PREDICTED: uncharacterized protein At4g10930-like [Jatropha curcas]
7 Hb_000946_120 0.0743757818 - - DNA binding protein, putative [Ricinus communis]
8 Hb_023001_020 0.0753213335 - - PREDICTED: mitochondrial succinate-fumarate transporter 1 [Jatropha curcas]
9 Hb_004162_280 0.0759208573 - - PREDICTED: uncharacterized protein LOC105628004 isoform X1 [Jatropha curcas]
10 Hb_054865_100 0.0767122426 - - PREDICTED: probable protein S-acyltransferase 12 isoform X1 [Jatropha curcas]
11 Hb_021422_010 0.0785461856 - - PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Jatropha curcas]
12 Hb_005245_130 0.0801379905 - - PREDICTED: uncharacterized protein LOC105643730 [Jatropha curcas]
13 Hb_012132_030 0.0803905656 - - PREDICTED: RNA polymerase-associated protein CTR9 homolog [Jatropha curcas]
14 Hb_075481_030 0.0825902611 - - PREDICTED: DNA-binding protein RHL1 isoform X3 [Jatropha curcas]
15 Hb_000342_110 0.082962786 - - PREDICTED: uncharacterized protein LOC105638174 [Jatropha curcas]
16 Hb_000477_030 0.0833087867 - - PREDICTED: boron transporter 4-like [Jatropha curcas]
17 Hb_004701_030 0.0838190743 - - hypothetical protein POPTR_0015s00420g [Populus trichocarpa]
18 Hb_000140_080 0.0838260312 transcription factor TF Family: MYB-related PREDICTED: protein REVEILLE 3-like isoform X1 [Jatropha curcas]
19 Hb_005505_050 0.0838997481 - - PREDICTED: uncharacterized protein LOC105639309 isoform X2 [Jatropha curcas]
20 Hb_106552_050 0.0847001792 - - PREDICTED: uncharacterized protein LOC105642134 [Jatropha curcas]

Gene co-expression network

sample Hb_001541_260 Hb_001541_260 Hb_144787_030 Hb_144787_030 Hb_001541_260--Hb_144787_030 Hb_000236_100 Hb_000236_100 Hb_001541_260--Hb_000236_100 Hb_000139_250 Hb_000139_250 Hb_001541_260--Hb_000139_250 Hb_000465_470 Hb_000465_470 Hb_001541_260--Hb_000465_470 Hb_000032_490 Hb_000032_490 Hb_001541_260--Hb_000032_490 Hb_000946_120 Hb_000946_120 Hb_001541_260--Hb_000946_120 Hb_004162_280 Hb_004162_280 Hb_144787_030--Hb_004162_280 Hb_144787_030--Hb_000139_250 Hb_144787_030--Hb_000946_120 Hb_144787_030--Hb_000236_100 Hb_000422_140 Hb_000422_140 Hb_144787_030--Hb_000422_140 Hb_000236_100--Hb_004162_280 Hb_005245_130 Hb_005245_130 Hb_000236_100--Hb_005245_130 Hb_002027_260 Hb_002027_260 Hb_000236_100--Hb_002027_260 Hb_010222_080 Hb_010222_080 Hb_000236_100--Hb_010222_080 Hb_002942_220 Hb_002942_220 Hb_000139_250--Hb_002942_220 Hb_023001_020 Hb_023001_020 Hb_000139_250--Hb_023001_020 Hb_000424_010 Hb_000424_010 Hb_000139_250--Hb_000424_010 Hb_012654_010 Hb_012654_010 Hb_000139_250--Hb_012654_010 Hb_000803_300 Hb_000803_300 Hb_000139_250--Hb_000803_300 Hb_106552_050 Hb_106552_050 Hb_000465_470--Hb_106552_050 Hb_000465_470--Hb_000236_100 Hb_000663_040 Hb_000663_040 Hb_000465_470--Hb_000663_040 Hb_002301_220 Hb_002301_220 Hb_000465_470--Hb_002301_220 Hb_000465_470--Hb_000032_490 Hb_002351_020 Hb_002351_020 Hb_000032_490--Hb_002351_020 Hb_021422_010 Hb_021422_010 Hb_000032_490--Hb_021422_010 Hb_000032_490--Hb_000946_120 Hb_000832_090 Hb_000832_090 Hb_000032_490--Hb_000832_090 Hb_000365_140 Hb_000365_140 Hb_000032_490--Hb_000365_140 Hb_012132_030 Hb_012132_030 Hb_000946_120--Hb_012132_030 Hb_000946_120--Hb_000365_140 Hb_000946_120--Hb_000422_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.6256 12.2638 8.69925 5.3358 27.418 16.757
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.1485 12.8334 10.097 8.09314 5.28424

CAGE analysis