Hb_000365_140

Information

Type -
Description -
Location Contig365: 144260-152774
Sequence    

Annotation

kegg
ID rcu:RCOM_1323420
description Ethanolamine-phosphate cytidylyltransferase, putative (EC:2.7.7.14)
nr
ID XP_012090960.1
description PREDICTED: ethanolamine-phosphate cytidylyltransferase [Jatropha curcas]
swissprot
ID Q9ZVI9
description Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana GN=PECT1 PE=1 SV=1
trembl
ID A0A067JQK3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00601 PE=4 SV=1
Gene Ontology
ID GO:0005634
description ethanolamine-phosphate cytidylyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37561: 144236-152807 , PASA_asmbl_37562: 146593-146936 , PASA_asmbl_37563: 149859-150184
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000365_140 0.0 - - PREDICTED: ethanolamine-phosphate cytidylyltransferase [Jatropha curcas]
2 Hb_002477_130 0.0663485969 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000946_120 0.0716698094 - - DNA binding protein, putative [Ricinus communis]
4 Hb_000032_490 0.0760202014 - - PREDICTED: uncharacterized protein At4g10930-like [Jatropha curcas]
5 Hb_000422_140 0.0760218504 - - PREDICTED: apoptosis-inducing factor 2-like isoform X1 [Jatropha curcas]
6 Hb_000640_220 0.0765489415 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-4 [Jatropha curcas]
7 Hb_005895_040 0.0837193956 - - PREDICTED: tRNA threonylcarbamoyladenosine dehydratase [Jatropha curcas]
8 Hb_025669_020 0.0866350302 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001771_120 0.0871694513 - - K+ transport growth defect-like protein [Hevea brasiliensis]
10 Hb_001584_290 0.0874473554 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
11 Hb_002221_050 0.0875948497 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP65 isoform X1 [Jatropha curcas]
12 Hb_001083_030 0.0913846053 - - PREDICTED: probable E3 ubiquitin ligase complex SCF subunit sconB [Jatropha curcas]
13 Hb_008595_010 0.0932671445 - - PREDICTED: pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Jatropha curcas]
14 Hb_002499_070 0.0942477606 - - PREDICTED: uncharacterized protein LOC105628378 isoform X2 [Jatropha curcas]
15 Hb_001502_060 0.0943744571 - - DNA mismatch repair protein MSH2, putative [Ricinus communis]
16 Hb_003126_100 0.0945140983 - - hypothetical protein POPTR_0005s11280g [Populus trichocarpa]
17 Hb_003018_130 0.0946210208 - - PREDICTED: uncharacterized protein LOC105628777 [Jatropha curcas]
18 Hb_000424_010 0.0948111948 - - PREDICTED: F-box/LRR-repeat protein 15 isoform X1 [Jatropha curcas]
19 Hb_004656_060 0.096876237 - - PREDICTED: uncharacterized protein LOC105634581 [Jatropha curcas]
20 Hb_002587_020 0.0971678774 - - nucleic acid binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000365_140 Hb_000365_140 Hb_002477_130 Hb_002477_130 Hb_000365_140--Hb_002477_130 Hb_000946_120 Hb_000946_120 Hb_000365_140--Hb_000946_120 Hb_000032_490 Hb_000032_490 Hb_000365_140--Hb_000032_490 Hb_000422_140 Hb_000422_140 Hb_000365_140--Hb_000422_140 Hb_000640_220 Hb_000640_220 Hb_000365_140--Hb_000640_220 Hb_005895_040 Hb_005895_040 Hb_000365_140--Hb_005895_040 Hb_000424_010 Hb_000424_010 Hb_002477_130--Hb_000424_010 Hb_002477_130--Hb_005895_040 Hb_002477_130--Hb_000640_220 Hb_000358_250 Hb_000358_250 Hb_002477_130--Hb_000358_250 Hb_001771_120 Hb_001771_120 Hb_002477_130--Hb_001771_120 Hb_012132_030 Hb_012132_030 Hb_000946_120--Hb_012132_030 Hb_144787_030 Hb_144787_030 Hb_000946_120--Hb_144787_030 Hb_000946_120--Hb_000032_490 Hb_000946_120--Hb_000422_140 Hb_001541_260 Hb_001541_260 Hb_000946_120--Hb_001541_260 Hb_002351_020 Hb_002351_020 Hb_000032_490--Hb_002351_020 Hb_021422_010 Hb_021422_010 Hb_000032_490--Hb_021422_010 Hb_000832_090 Hb_000832_090 Hb_000032_490--Hb_000832_090 Hb_000032_490--Hb_001541_260 Hb_000422_140--Hb_005895_040 Hb_000422_140--Hb_144787_030 Hb_004656_060 Hb_004656_060 Hb_000422_140--Hb_004656_060 Hb_000422_140--Hb_002477_130 Hb_000640_220--Hb_021422_010 Hb_000104_080 Hb_000104_080 Hb_000640_220--Hb_000104_080 Hb_001584_290 Hb_001584_290 Hb_000640_220--Hb_001584_290 Hb_003126_100 Hb_003126_100 Hb_000640_220--Hb_003126_100 Hb_009151_020 Hb_009151_020 Hb_005895_040--Hb_009151_020 Hb_005895_040--Hb_004656_060 Hb_004701_030 Hb_004701_030 Hb_005895_040--Hb_004701_030 Hb_002499_070 Hb_002499_070 Hb_005895_040--Hb_002499_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
66.0239 51.4468 41.7863 35.8981 140.286 80.2059
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
40.189 32.909 46.2478 27.6153 35.7326

CAGE analysis