Hb_004656_060

Information

Type -
Description -
Location Contig4656: 60844-66724
Sequence    

Annotation

kegg
ID rcu:RCOM_1533790
description hypothetical protein
nr
ID XP_012072846.1
description PREDICTED: uncharacterized protein LOC105634581 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L0D8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05998 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004656_060 0.0 - - PREDICTED: uncharacterized protein LOC105634581 [Jatropha curcas]
2 Hb_004701_030 0.0620122276 - - hypothetical protein POPTR_0015s00420g [Populus trichocarpa]
3 Hb_000422_140 0.0694269789 - - PREDICTED: apoptosis-inducing factor 2-like isoform X1 [Jatropha curcas]
4 Hb_005895_040 0.0741111311 - - PREDICTED: tRNA threonylcarbamoyladenosine dehydratase [Jatropha curcas]
5 Hb_023001_020 0.0821010996 - - PREDICTED: mitochondrial succinate-fumarate transporter 1 [Jatropha curcas]
6 Hb_000640_220 0.086887081 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-4 [Jatropha curcas]
7 Hb_002587_020 0.0869885118 - - nucleic acid binding protein, putative [Ricinus communis]
8 Hb_144787_030 0.0878813644 - - PREDICTED: protein SLOW GREEN 1, chloroplastic [Jatropha curcas]
9 Hb_002652_040 0.0879873978 - - PREDICTED: ribonuclease P protein subunit p25-like protein [Jatropha curcas]
10 Hb_004678_020 0.0882294155 - - PREDICTED: protein YIF1B [Jatropha curcas]
11 Hb_001584_290 0.0898734697 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
12 Hb_000139_250 0.0900527461 - - PREDICTED: putative methyltransferase C9orf114 [Jatropha curcas]
13 Hb_001754_240 0.0912059388 - - PREDICTED: mitochondrial thiamine pyrophosphate carrier isoform X1 [Jatropha curcas]
14 Hb_000104_080 0.0919085075 - - PREDICTED: WD repeat domain-containing protein 83 [Jatropha curcas]
15 Hb_073171_080 0.0931681967 - - PREDICTED: MMS19 nucleotide excision repair protein homolog isoform X1 [Jatropha curcas]
16 Hb_000906_060 0.0936864279 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g08820 [Populus euphratica]
17 Hb_010222_080 0.0952180715 - - PREDICTED: pentatricopeptide repeat-containing protein At2g06000 [Jatropha curcas]
18 Hb_020665_030 0.096231034 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000365_140 0.096876237 - - PREDICTED: ethanolamine-phosphate cytidylyltransferase [Jatropha curcas]
20 Hb_001541_260 0.097032366 - - PREDICTED: protein MAK16 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_004656_060 Hb_004656_060 Hb_004701_030 Hb_004701_030 Hb_004656_060--Hb_004701_030 Hb_000422_140 Hb_000422_140 Hb_004656_060--Hb_000422_140 Hb_005895_040 Hb_005895_040 Hb_004656_060--Hb_005895_040 Hb_023001_020 Hb_023001_020 Hb_004656_060--Hb_023001_020 Hb_000640_220 Hb_000640_220 Hb_004656_060--Hb_000640_220 Hb_002587_020 Hb_002587_020 Hb_004656_060--Hb_002587_020 Hb_004701_030--Hb_023001_020 Hb_003091_010 Hb_003091_010 Hb_004701_030--Hb_003091_010 Hb_004678_020 Hb_004678_020 Hb_004701_030--Hb_004678_020 Hb_004701_030--Hb_005895_040 Hb_000104_080 Hb_000104_080 Hb_004701_030--Hb_000104_080 Hb_000422_140--Hb_005895_040 Hb_144787_030 Hb_144787_030 Hb_000422_140--Hb_144787_030 Hb_000946_120 Hb_000946_120 Hb_000422_140--Hb_000946_120 Hb_000365_140 Hb_000365_140 Hb_000422_140--Hb_000365_140 Hb_002477_130 Hb_002477_130 Hb_000422_140--Hb_002477_130 Hb_009151_020 Hb_009151_020 Hb_005895_040--Hb_009151_020 Hb_005895_040--Hb_002477_130 Hb_002499_070 Hb_002499_070 Hb_005895_040--Hb_002499_070 Hb_000139_250 Hb_000139_250 Hb_023001_020--Hb_000139_250 Hb_023001_020--Hb_000104_080 Hb_000923_040 Hb_000923_040 Hb_023001_020--Hb_000923_040 Hb_023001_020--Hb_004678_020 Hb_005701_040 Hb_005701_040 Hb_023001_020--Hb_005701_040 Hb_021422_010 Hb_021422_010 Hb_000640_220--Hb_021422_010 Hb_000640_220--Hb_002477_130 Hb_000640_220--Hb_000104_080 Hb_001584_290 Hb_001584_290 Hb_000640_220--Hb_001584_290 Hb_000640_220--Hb_000365_140 Hb_003126_100 Hb_003126_100 Hb_000640_220--Hb_003126_100 Hb_002587_020--Hb_001584_290 Hb_008143_030 Hb_008143_030 Hb_002587_020--Hb_008143_030 Hb_002652_040 Hb_002652_040 Hb_002587_020--Hb_002652_040 Hb_030827_030 Hb_030827_030 Hb_002587_020--Hb_030827_030 Hb_008595_010 Hb_008595_010 Hb_002587_020--Hb_008595_010 Hb_007407_040 Hb_007407_040 Hb_002587_020--Hb_007407_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.2987 7.6835 6.30696 3.03927 24.0041 16.7547
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.46553 6.46329 6.01967 4.82396 3.75449

CAGE analysis