Hb_006816_520

Information

Type -
Description -
Location Contig6816: 331060-332198
Sequence    

Annotation

kegg
ID rcu:RCOM_1433900
description epoxide hydrolase, putative (EC:2.7.10.2)
nr
ID XP_002512456.1
description epoxide hydrolase, putative [Ricinus communis]
swissprot
ID P34913
description Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2
trembl
ID B9RFD7
description Epoxide hydrolase, putative OS=Ricinus communis GN=RCOM_1433900 PE=4 SV=1
Gene Ontology
ID GO:0004715
description bifunctional epoxide hydrolase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53860: 331439-332205
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006816_520 0.0 - - epoxide hydrolase, putative [Ricinus communis]
2 Hb_011242_020 0.2670455173 - - multidrug resistance pump, putative [Ricinus communis]
3 Hb_062447_010 0.2809237664 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
4 Hb_002475_080 0.285087633 transcription factor TF Family: PHD PREDICTED: PHD finger protein MALE MEIOCYTE DEATH 1 [Jatropha curcas]
5 Hb_014068_020 0.2924922353 - - PREDICTED: uncharacterized protein LOC105628343 [Jatropha curcas]
6 Hb_001247_020 0.301589969 - - galactinol synthase family protein [Populus trichocarpa]
7 Hb_007218_060 0.3096986878 - - PREDICTED: polyadenylate-binding protein 6 isoform X1 [Jatropha curcas]
8 Hb_000140_250 0.3097559705 - - Late embryogenesis abundant protein Lea14-A, putative [Ricinus communis]
9 Hb_000215_150 0.3110116517 - - PREDICTED: uncharacterized protein LOC100249186 [Vitis vinifera]
10 Hb_003058_030 0.3143897568 - - calcium-dependent protein kinase, putative [Ricinus communis]
11 Hb_000890_180 0.3172135255 - - glutaredoxin, grx, putative [Ricinus communis]
12 Hb_000020_070 0.318545109 - - PREDICTED: probable serine/threonine-protein kinase NAK [Jatropha curcas]
13 Hb_000853_310 0.3189627387 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 16-like [Populus euphratica]
14 Hb_007894_180 0.3196373622 - - PREDICTED: cytochrome P450 716B1-like [Jatropha curcas]
15 Hb_001926_020 0.330374933 - - PREDICTED: glutamate receptor 2.9-like [Jatropha curcas]
16 Hb_015475_010 0.3335264772 - - hypothetical protein VITISV_034342 [Vitis vinifera]
17 Hb_004201_040 0.3349608688 - - Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]
18 Hb_002701_230 0.3353032094 - - PREDICTED: uncharacterized protein LOC105646833 [Jatropha curcas]
19 Hb_008173_130 0.3356866393 - - PREDICTED: uncharacterized protein LOC105645815 isoform X1 [Jatropha curcas]
20 Hb_115962_010 0.3357693821 - - receptor serine/threonine kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_006816_520 Hb_006816_520 Hb_011242_020 Hb_011242_020 Hb_006816_520--Hb_011242_020 Hb_062447_010 Hb_062447_010 Hb_006816_520--Hb_062447_010 Hb_002475_080 Hb_002475_080 Hb_006816_520--Hb_002475_080 Hb_014068_020 Hb_014068_020 Hb_006816_520--Hb_014068_020 Hb_001247_020 Hb_001247_020 Hb_006816_520--Hb_001247_020 Hb_007218_060 Hb_007218_060 Hb_006816_520--Hb_007218_060 Hb_132384_010 Hb_132384_010 Hb_011242_020--Hb_132384_010 Hb_000613_230 Hb_000613_230 Hb_011242_020--Hb_000613_230 Hb_087203_010 Hb_087203_010 Hb_011242_020--Hb_087203_010 Hb_003020_060 Hb_003020_060 Hb_011242_020--Hb_003020_060 Hb_002493_010 Hb_002493_010 Hb_011242_020--Hb_002493_010 Hb_012799_040 Hb_012799_040 Hb_062447_010--Hb_012799_040 Hb_001660_130 Hb_001660_130 Hb_062447_010--Hb_001660_130 Hb_000402_180 Hb_000402_180 Hb_062447_010--Hb_000402_180 Hb_002783_130 Hb_002783_130 Hb_062447_010--Hb_002783_130 Hb_134022_010 Hb_134022_010 Hb_062447_010--Hb_134022_010 Hb_000156_080 Hb_000156_080 Hb_062447_010--Hb_000156_080 Hb_000935_080 Hb_000935_080 Hb_002475_080--Hb_000935_080 Hb_114310_100 Hb_114310_100 Hb_002475_080--Hb_114310_100 Hb_000317_270 Hb_000317_270 Hb_002475_080--Hb_000317_270 Hb_002662_040 Hb_002662_040 Hb_002475_080--Hb_002662_040 Hb_008747_010 Hb_008747_010 Hb_002475_080--Hb_008747_010 Hb_000320_260 Hb_000320_260 Hb_002475_080--Hb_000320_260 Hb_000985_070 Hb_000985_070 Hb_014068_020--Hb_000985_070 Hb_164162_010 Hb_164162_010 Hb_014068_020--Hb_164162_010 Hb_000042_370 Hb_000042_370 Hb_014068_020--Hb_000042_370 Hb_012092_100 Hb_012092_100 Hb_014068_020--Hb_012092_100 Hb_000000_130 Hb_000000_130 Hb_014068_020--Hb_000000_130 Hb_000125_220 Hb_000125_220 Hb_014068_020--Hb_000125_220 Hb_000020_070 Hb_000020_070 Hb_001247_020--Hb_000020_070 Hb_000123_240 Hb_000123_240 Hb_001247_020--Hb_000123_240 Hb_005080_020 Hb_005080_020 Hb_001247_020--Hb_005080_020 Hb_048476_040 Hb_048476_040 Hb_001247_020--Hb_048476_040 Hb_001247_020--Hb_007218_060 Hb_012366_050 Hb_012366_050 Hb_001247_020--Hb_012366_050 Hb_000086_620 Hb_000086_620 Hb_007218_060--Hb_000086_620 Hb_119316_020 Hb_119316_020 Hb_007218_060--Hb_119316_020 Hb_001369_020 Hb_001369_020 Hb_007218_060--Hb_001369_020 Hb_001636_060 Hb_001636_060 Hb_007218_060--Hb_001636_060 Hb_001511_250 Hb_001511_250 Hb_007218_060--Hb_001511_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.137879 0.325883 0.0770422 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.155716 0 0.0865078

CAGE analysis