Hb_002783_130

Information

Type -
Description -
Location Contig2783: 157286-157825
Sequence    

Annotation

kegg
ID pop:POPTR_0002s02240g
description POPTRDRAFT_550872; hypothetical protein
nr
ID XP_012073785.1
description PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Jatropha curcas]
swissprot
ID Q9FYB5
description Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana GN=ATJ11 PE=1 SV=2
trembl
ID A0A067KPH3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08204 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 002_B09.ab1: 157111-157888 , 052_M21.ab1: 157140-157888

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002783_130 0.0 - - PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Jatropha curcas]
2 Hb_001660_130 0.0811385347 - - PREDICTED: serine/threonine-protein kinase-like protein CCR4 [Jatropha curcas]
3 Hb_070613_010 0.106069545 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
4 Hb_000418_060 0.1123139897 - - PREDICTED: probable ribose-5-phosphate isomerase 2 [Jatropha curcas]
5 Hb_004109_150 0.1140389172 - - glutathione-S-transferase tau 1 [Hevea brasiliensis]
6 Hb_006002_020 0.1199776178 - - PREDICTED: cytokinin dehydrogenase 7 [Jatropha curcas]
7 Hb_134022_010 0.1256758276 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
8 Hb_021254_020 0.1269751225 - - calmodulin binding protein, putative [Ricinus communis]
9 Hb_000402_180 0.130229752 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
10 Hb_004393_030 0.131697119 - - CBL-interacting protein kinase 6 [Populus trichocarpa]
11 Hb_002110_050 0.1337735315 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000156_080 0.1342396915 - - Potassium channel KAT2, putative [Ricinus communis]
13 Hb_012799_040 0.1351558915 - - PREDICTED: transmembrane ascorbate ferrireductase 1 [Jatropha curcas]
14 Hb_007007_030 0.1362216434 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002548_020 0.1368976441 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
16 Hb_002301_340 0.1372952575 transcription factor TF Family: B3 leafy cotyledon 2 [Ricinus communis]
17 Hb_003078_070 0.141475976 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At3g25290 [Jatropha curcas]
18 Hb_000032_090 0.1423143992 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000892_030 0.1431109803 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
20 Hb_000032_230 0.1444852884 transcription factor TF Family: ERF hypothetical protein JCGZ_20463 [Jatropha curcas]

Gene co-expression network

sample Hb_002783_130 Hb_002783_130 Hb_001660_130 Hb_001660_130 Hb_002783_130--Hb_001660_130 Hb_070613_010 Hb_070613_010 Hb_002783_130--Hb_070613_010 Hb_000418_060 Hb_000418_060 Hb_002783_130--Hb_000418_060 Hb_004109_150 Hb_004109_150 Hb_002783_130--Hb_004109_150 Hb_006002_020 Hb_006002_020 Hb_002783_130--Hb_006002_020 Hb_134022_010 Hb_134022_010 Hb_002783_130--Hb_134022_010 Hb_004393_030 Hb_004393_030 Hb_001660_130--Hb_004393_030 Hb_021254_020 Hb_021254_020 Hb_001660_130--Hb_021254_020 Hb_000402_180 Hb_000402_180 Hb_001660_130--Hb_000402_180 Hb_008810_030 Hb_008810_030 Hb_001660_130--Hb_008810_030 Hb_012799_040 Hb_012799_040 Hb_001660_130--Hb_012799_040 Hb_002301_340 Hb_002301_340 Hb_070613_010--Hb_002301_340 Hb_002548_020 Hb_002548_020 Hb_070613_010--Hb_002548_020 Hb_070613_010--Hb_134022_010 Hb_070613_010--Hb_000402_180 Hb_002110_050 Hb_002110_050 Hb_070613_010--Hb_002110_050 Hb_000418_060--Hb_006002_020 Hb_000047_010 Hb_000047_010 Hb_000418_060--Hb_000047_010 Hb_001254_020 Hb_001254_020 Hb_000418_060--Hb_001254_020 Hb_000319_010 Hb_000319_010 Hb_000418_060--Hb_000319_010 Hb_011915_020 Hb_011915_020 Hb_000418_060--Hb_011915_020 Hb_002030_100 Hb_002030_100 Hb_004109_150--Hb_002030_100 Hb_000156_080 Hb_000156_080 Hb_004109_150--Hb_000156_080 Hb_006358_030 Hb_006358_030 Hb_004109_150--Hb_006358_030 Hb_000656_260 Hb_000656_260 Hb_004109_150--Hb_000656_260 Hb_036492_020 Hb_036492_020 Hb_004109_150--Hb_036492_020 Hb_006002_020--Hb_000047_010 Hb_006153_020 Hb_006153_020 Hb_006002_020--Hb_006153_020 Hb_002725_080 Hb_002725_080 Hb_006002_020--Hb_002725_080 Hb_004109_110 Hb_004109_110 Hb_006002_020--Hb_004109_110 Hb_010417_110 Hb_010417_110 Hb_006002_020--Hb_010417_110 Hb_004724_300 Hb_004724_300 Hb_134022_010--Hb_004724_300 Hb_134022_010--Hb_008810_030 Hb_134022_010--Hb_000402_180 Hb_134022_010--Hb_036492_020 Hb_001821_050 Hb_001821_050 Hb_134022_010--Hb_001821_050 Hb_134022_010--Hb_004393_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.818789 351.21 257.502 179.965 0.153706 0.68628
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.74448 5.96467 4.96721 3.00244 117.377

CAGE analysis