Hb_006738_060

Information

Type -
Description -
Location Contig6738: 37213-48069
Sequence    

Annotation

kegg
ID rcu:RCOM_1494360
description ATP binding protein, putative (EC:2.7.11.25)
nr
ID XP_002516042.1
description ATP binding protein, putative [Ricinus communis]
swissprot
ID Q9C821
description Proline-rich receptor-like protein kinase PERK15 OS=Arabidopsis thaliana GN=PERK15 PE=2 SV=1
trembl
ID B9RQM3
description ATP binding protein, putative OS=Ricinus communis GN=RCOM_1494360 PE=3 SV=1
Gene Ontology
ID GO:0005622
description proline-rich receptor-like protein kinase perk15

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53515: 46698-47774
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006738_060 0.0 - - ATP binding protein, putative [Ricinus communis]
2 Hb_002686_400 0.1495257718 - - hypothetical protein POPTR_0019s04500g [Populus trichocarpa]
3 Hb_000984_100 0.159691847 - - receptor protein kinase, putative [Ricinus communis]
4 Hb_057079_020 0.1622570711 - - conserved hypothetical protein [Ricinus communis]
5 Hb_007618_010 0.1692747206 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
6 Hb_000189_120 0.1714952495 transcription factor TF Family: bHLH PREDICTED: transcription factor UNE12-like isoform X5 [Jatropha curcas]
7 Hb_001608_030 0.1741375214 - - Protein NSP-INTERACTING KINASE 1 [Glycine soja]
8 Hb_000532_130 0.1768746769 - - hypothetical protein [Anabaena sp. PCC 7108]
9 Hb_001879_050 0.1801946068 - - Disease resistance protein RFL1, putative [Ricinus communis]
10 Hb_000233_100 0.1821826033 desease resistance Gene Name: NB-ARC Disease resistance protein RPS5, putative [Ricinus communis]
11 Hb_011310_200 0.1829801129 - - grr1, plant, putative [Ricinus communis]
12 Hb_004466_070 0.1855480859 - - hypothetical protein RCOM_1447500 [Ricinus communis]
13 Hb_001544_080 0.1886028987 - - PREDICTED: 66 kDa stress protein-like [Jatropha curcas]
14 Hb_089100_040 0.1904970936 - - PREDICTED: uncharacterized protein LOC105638961 [Jatropha curcas]
15 Hb_025194_010 0.1909215551 - - PREDICTED: uncharacterized protein LOC105644857 [Jatropha curcas]
16 Hb_001408_150 0.1909467995 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
17 Hb_001921_010 0.1910630505 - - ATP-dependent RNA helicase, putative [Ricinus communis]
18 Hb_008175_030 0.1913452634 transcription factor TF Family: TAZ PREDICTED: BTB/POZ and TAZ domain-containing protein 3 [Jatropha curcas]
19 Hb_004976_040 0.1926236466 - - PREDICTED: protein HASTY 1 [Jatropha curcas]
20 Hb_000007_160 0.1940580946 - - hypothetical protein POPTR_0008s10970g [Populus trichocarpa]

Gene co-expression network

sample Hb_006738_060 Hb_006738_060 Hb_002686_400 Hb_002686_400 Hb_006738_060--Hb_002686_400 Hb_000984_100 Hb_000984_100 Hb_006738_060--Hb_000984_100 Hb_057079_020 Hb_057079_020 Hb_006738_060--Hb_057079_020 Hb_007618_010 Hb_007618_010 Hb_006738_060--Hb_007618_010 Hb_000189_120 Hb_000189_120 Hb_006738_060--Hb_000189_120 Hb_001608_030 Hb_001608_030 Hb_006738_060--Hb_001608_030 Hb_009897_020 Hb_009897_020 Hb_002686_400--Hb_009897_020 Hb_000010_350 Hb_000010_350 Hb_002686_400--Hb_000010_350 Hb_033642_070 Hb_033642_070 Hb_002686_400--Hb_033642_070 Hb_002760_040 Hb_002760_040 Hb_002686_400--Hb_002760_040 Hb_000866_370 Hb_000866_370 Hb_002686_400--Hb_000866_370 Hb_001879_050 Hb_001879_050 Hb_000984_100--Hb_001879_050 Hb_000544_020 Hb_000544_020 Hb_000984_100--Hb_000544_020 Hb_000984_100--Hb_001608_030 Hb_002571_010 Hb_002571_010 Hb_000984_100--Hb_002571_010 Hb_003371_260 Hb_003371_260 Hb_000984_100--Hb_003371_260 Hb_004466_070 Hb_004466_070 Hb_000984_100--Hb_004466_070 Hb_000778_020 Hb_000778_020 Hb_057079_020--Hb_000778_020 Hb_001410_010 Hb_001410_010 Hb_057079_020--Hb_001410_010 Hb_013749_060 Hb_013749_060 Hb_057079_020--Hb_013749_060 Hb_011310_200 Hb_011310_200 Hb_057079_020--Hb_011310_200 Hb_008175_030 Hb_008175_030 Hb_057079_020--Hb_008175_030 Hb_010253_020 Hb_010253_020 Hb_057079_020--Hb_010253_020 Hb_007618_010--Hb_008175_030 Hb_000532_130 Hb_000532_130 Hb_007618_010--Hb_000532_130 Hb_007618_010--Hb_057079_020 Hb_000088_160 Hb_000088_160 Hb_007618_010--Hb_000088_160 Hb_002739_060 Hb_002739_060 Hb_007618_010--Hb_002739_060 Hb_007253_040 Hb_007253_040 Hb_007618_010--Hb_007253_040 Hb_001584_010 Hb_001584_010 Hb_000189_120--Hb_001584_010 Hb_000189_120--Hb_000778_020 Hb_000189_120--Hb_008175_030 Hb_000189_120--Hb_010253_020 Hb_000189_120--Hb_057079_020 Hb_000007_160 Hb_000007_160 Hb_000189_120--Hb_000007_160 Hb_007137_030 Hb_007137_030 Hb_001608_030--Hb_007137_030 Hb_093177_010 Hb_093177_010 Hb_001608_030--Hb_093177_010 Hb_158696_010 Hb_158696_010 Hb_001608_030--Hb_158696_010 Hb_010080_020 Hb_010080_020 Hb_001608_030--Hb_010080_020 Hb_001608_030--Hb_000007_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.56735 20.8823 0.631639 5.45086 3.47254 1.73225
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.407454 0.149602 0.161312 8.05754 2.96494

CAGE analysis