Hb_006452_130

Information

Type -
Description -
Location Contig6452: 94308-99273
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006452_130 0.0 - - -
2 Hb_001301_190 0.2511988691 - - -
3 Hb_009012_010 0.2889981698 - - -
4 Hb_001660_090 0.2943868187 - - PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic-like [Jatropha curcas]
5 Hb_008064_010 0.3013879777 - - PREDICTED: ubiquitin-like domain-containing CTD phosphatase 1 [Jatropha curcas]
6 Hb_003849_260 0.3049306638 - - PREDICTED: uncharacterized protein LOC105644666 [Jatropha curcas]
7 Hb_003906_190 0.3083234266 - - hypothetical protein EUGRSUZ_K00213 [Eucalyptus grandis]
8 Hb_001999_250 0.3096956195 - - PREDICTED: uncharacterized protein LOC105133073 isoform X1 [Populus euphratica]
9 Hb_001102_170 0.3099248336 - - PREDICTED: protein FLX-like 1 [Jatropha curcas]
10 Hb_003376_310 0.3099660542 - - hypothetical protein JCGZ_16500 [Jatropha curcas]
11 Hb_023647_040 0.315225161 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
12 Hb_000836_120 0.316722404 - - syntaxin, putative [Ricinus communis]
13 Hb_001247_230 0.3220008546 - - nucleic acid binding protein, putative [Ricinus communis]
14 Hb_009355_030 0.3223432732 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001504_190 0.3247214711 - - double-stranded RNA binding protein, putative [Ricinus communis]
16 Hb_001584_220 0.325453466 - - galactinol synthase [Manihot esculenta]
17 Hb_003626_060 0.3291598803 - - PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Jatropha curcas]
18 Hb_002417_060 0.3305340037 - - Cell division cycle protein, putative [Ricinus communis]
19 Hb_003633_140 0.3307966297 - - PREDICTED: uncharacterized protein LOC105647486 isoform X1 [Jatropha curcas]
20 Hb_001638_040 0.331778263 - - Nucleobase-ascorbate transporter 3 [Glycine soja]

Gene co-expression network

sample Hb_006452_130 Hb_006452_130 Hb_001301_190 Hb_001301_190 Hb_006452_130--Hb_001301_190 Hb_009012_010 Hb_009012_010 Hb_006452_130--Hb_009012_010 Hb_001660_090 Hb_001660_090 Hb_006452_130--Hb_001660_090 Hb_008064_010 Hb_008064_010 Hb_006452_130--Hb_008064_010 Hb_003849_260 Hb_003849_260 Hb_006452_130--Hb_003849_260 Hb_003906_190 Hb_003906_190 Hb_006452_130--Hb_003906_190 Hb_009355_030 Hb_009355_030 Hb_001301_190--Hb_009355_030 Hb_000753_210 Hb_000753_210 Hb_001301_190--Hb_000753_210 Hb_003299_080 Hb_003299_080 Hb_001301_190--Hb_003299_080 Hb_183510_010 Hb_183510_010 Hb_001301_190--Hb_183510_010 Hb_001247_230 Hb_001247_230 Hb_001301_190--Hb_001247_230 Hb_000050_090 Hb_000050_090 Hb_001301_190--Hb_000050_090 Hb_000107_320 Hb_000107_320 Hb_009012_010--Hb_000107_320 Hb_000402_010 Hb_000402_010 Hb_009012_010--Hb_000402_010 Hb_005975_020 Hb_005975_020 Hb_009012_010--Hb_005975_020 Hb_117240_010 Hb_117240_010 Hb_009012_010--Hb_117240_010 Hb_054328_010 Hb_054328_010 Hb_009012_010--Hb_054328_010 Hb_001053_030 Hb_001053_030 Hb_001660_090--Hb_001053_030 Hb_002609_090 Hb_002609_090 Hb_001660_090--Hb_002609_090 Hb_001638_040 Hb_001638_040 Hb_001660_090--Hb_001638_040 Hb_003633_140 Hb_003633_140 Hb_001660_090--Hb_003633_140 Hb_001660_090--Hb_003849_260 Hb_000836_120 Hb_000836_120 Hb_001660_090--Hb_000836_120 Hb_000684_340 Hb_000684_340 Hb_008064_010--Hb_000684_340 Hb_033623_010 Hb_033623_010 Hb_008064_010--Hb_033623_010 Hb_006816_510 Hb_006816_510 Hb_008064_010--Hb_006816_510 Hb_154471_010 Hb_154471_010 Hb_008064_010--Hb_154471_010 Hb_143863_010 Hb_143863_010 Hb_008064_010--Hb_143863_010 Hb_001565_120 Hb_001565_120 Hb_008064_010--Hb_001565_120 Hb_002235_240 Hb_002235_240 Hb_003849_260--Hb_002235_240 Hb_003849_260--Hb_000836_120 Hb_001141_360 Hb_001141_360 Hb_003849_260--Hb_001141_360 Hb_004800_190 Hb_004800_190 Hb_003849_260--Hb_004800_190 Hb_001584_220 Hb_001584_220 Hb_003849_260--Hb_001584_220 Hb_002686_280 Hb_002686_280 Hb_003849_260--Hb_002686_280 Hb_002626_040 Hb_002626_040 Hb_003906_190--Hb_002626_040 Hb_011465_030 Hb_011465_030 Hb_003906_190--Hb_011465_030 Hb_000265_250 Hb_000265_250 Hb_003906_190--Hb_000265_250 Hb_002477_150 Hb_002477_150 Hb_003906_190--Hb_002477_150 Hb_003906_190--Hb_001247_230 Hb_025306_010 Hb_025306_010 Hb_003906_190--Hb_025306_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.038904 0.09211 0 0 0.0347243 0.0180749
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0395453 0 0 0.0124564 0

CAGE analysis