Hb_006816_510

Information

Type -
Description -
Location Contig6816: 329517-330032
Sequence    

Annotation

kegg
ID rcu:RCOM_1433910
description Pectinesterase inhibitor, putative
nr
ID XP_002512457.1
description Pectinesterase inhibitor, putative [Ricinus communis]
swissprot
ID Q8GT41
description Putative invertase inhibitor OS=Platanus acerifolia PE=1 SV=1
trembl
ID B9RFD8
description Pectinesterase inhibitor, putative OS=Ricinus communis GN=RCOM_1433910 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006816_510 0.0 - - Pectinesterase inhibitor, putative [Ricinus communis]
2 Hb_000171_040 0.1931049206 - - -
3 Hb_007333_020 0.2343095399 - - -
4 Hb_070745_010 0.2397877308 - - PREDICTED: mitogen-activated protein kinase kinase kinase A-like [Populus euphratica]
5 Hb_008064_010 0.2440556914 - - PREDICTED: ubiquitin-like domain-containing CTD phosphatase 1 [Jatropha curcas]
6 Hb_002641_100 0.2624918995 - - PREDICTED: uncharacterized protein LOC105115446 [Populus euphratica]
7 Hb_023024_010 0.2853670785 - - PREDICTED: uncharacterized protein LOC105767094 [Gossypium raimondii]
8 Hb_082219_010 0.2861006465 - - Os03g0264300, partial [Oryza sativa Japonica Group]
9 Hb_001081_040 0.2923494294 - - hypothetical protein MIMGU_mgv11b021166mg, partial [Erythranthe guttata]
10 Hb_010531_060 0.2942213001 - - hypothetical protein B456_010G209400, partial [Gossypium raimondii]
11 Hb_000336_300 0.2947000771 - - -
12 Hb_000994_010 0.2948676567 - - hypothetical protein JCGZ_13899 [Jatropha curcas]
13 Hb_184798_040 0.3010338364 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
14 Hb_000016_010 0.3060829601 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
15 Hb_008424_010 0.3064482624 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
16 Hb_005269_010 0.3122214141 - - -
17 Hb_033623_010 0.31390582 - - -
18 Hb_005432_050 0.3174860677 - - PREDICTED: uncharacterized protein LOC105772114 [Gossypium raimondii]
19 Hb_003362_060 0.3192183458 - - -
20 Hb_002269_010 0.3257659137 - - PREDICTED: WAT1-related protein At4g15540-like [Jatropha curcas]

Gene co-expression network

sample Hb_006816_510 Hb_006816_510 Hb_000171_040 Hb_000171_040 Hb_006816_510--Hb_000171_040 Hb_007333_020 Hb_007333_020 Hb_006816_510--Hb_007333_020 Hb_070745_010 Hb_070745_010 Hb_006816_510--Hb_070745_010 Hb_008064_010 Hb_008064_010 Hb_006816_510--Hb_008064_010 Hb_002641_100 Hb_002641_100 Hb_006816_510--Hb_002641_100 Hb_023024_010 Hb_023024_010 Hb_006816_510--Hb_023024_010 Hb_003362_060 Hb_003362_060 Hb_000171_040--Hb_003362_060 Hb_131949_010 Hb_131949_010 Hb_000171_040--Hb_131949_010 Hb_184798_040 Hb_184798_040 Hb_000171_040--Hb_184798_040 Hb_084426_010 Hb_084426_010 Hb_000171_040--Hb_084426_010 Hb_005975_020 Hb_005975_020 Hb_000171_040--Hb_005975_020 Hb_007333_020--Hb_070745_010 Hb_007333_020--Hb_000171_040 Hb_007333_020--Hb_008064_010 Hb_136850_040 Hb_136850_040 Hb_007333_020--Hb_136850_040 Hb_000146_060 Hb_000146_060 Hb_007333_020--Hb_000146_060 Hb_070745_010--Hb_000171_040 Hb_070745_010--Hb_000146_060 Hb_070745_010--Hb_008064_010 Hb_070745_010--Hb_136850_040 Hb_000684_340 Hb_000684_340 Hb_008064_010--Hb_000684_340 Hb_033623_010 Hb_033623_010 Hb_008064_010--Hb_033623_010 Hb_154471_010 Hb_154471_010 Hb_008064_010--Hb_154471_010 Hb_143863_010 Hb_143863_010 Hb_008064_010--Hb_143863_010 Hb_001565_120 Hb_001565_120 Hb_008064_010--Hb_001565_120 Hb_172864_010 Hb_172864_010 Hb_002641_100--Hb_172864_010 Hb_004352_020 Hb_004352_020 Hb_002641_100--Hb_004352_020 Hb_001277_140 Hb_001277_140 Hb_002641_100--Hb_001277_140 Hb_000380_070 Hb_000380_070 Hb_002641_100--Hb_000380_070 Hb_082219_010 Hb_082219_010 Hb_002641_100--Hb_082219_010 Hb_001922_160 Hb_001922_160 Hb_002641_100--Hb_001922_160 Hb_010531_060 Hb_010531_060 Hb_023024_010--Hb_010531_060 Hb_023024_010--Hb_082219_010 Hb_005269_010 Hb_005269_010 Hb_023024_010--Hb_005269_010 Hb_002269_010 Hb_002269_010 Hb_023024_010--Hb_002269_010 Hb_001703_100 Hb_001703_100 Hb_023024_010--Hb_001703_100 Hb_123056_010 Hb_123056_010 Hb_023024_010--Hb_123056_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0545506 0.233437 0 0 0.0512998 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis