Hb_084426_010

Information

Type -
Description -
Location Contig84426: 1376-5767
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_084426_010 0.0 - - -
2 Hb_003362_060 0.1331887831 - - -
3 Hb_131949_010 0.1423587543 - - PREDICTED: uncharacterized protein LOC104227863, partial [Nicotiana sylvestris]
4 Hb_022693_150 0.1529773892 - - -
5 Hb_000171_040 0.2072111487 - - -
6 Hb_000922_310 0.2663250137 transcription factor TF Family: MYB PREDICTED: transcription factor MYB98-like [Jatropha curcas]
7 Hb_000362_240 0.2698966902 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000146_060 0.2797527274 - - -
9 Hb_034569_020 0.2816720024 - - -
10 Hb_184798_040 0.2895999542 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
11 Hb_004899_280 0.2926803 - - -
12 Hb_005975_020 0.2947695293 - - -
13 Hb_023528_010 0.2953486132 - - hypothetical protein POPTR_0013s01580g [Populus trichocarpa]
14 Hb_004529_020 0.3040879774 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
15 Hb_004330_030 0.3124588383 - - -
16 Hb_000479_120 0.3159206799 transcription factor TF Family: FAR1 FAR1-related sequence 5 [Theobroma cacao]
17 Hb_009742_010 0.3164863625 - - -
18 Hb_004939_020 0.3171409259 - - gag/pol protein [Bryonia dioica]
19 Hb_092043_020 0.3255411217 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
20 Hb_008727_070 0.3284944355 - - PREDICTED: 16.9 kDa class I heat shock protein 1 isoform X1 [Zea mays]

Gene co-expression network

sample Hb_084426_010 Hb_084426_010 Hb_003362_060 Hb_003362_060 Hb_084426_010--Hb_003362_060 Hb_131949_010 Hb_131949_010 Hb_084426_010--Hb_131949_010 Hb_022693_150 Hb_022693_150 Hb_084426_010--Hb_022693_150 Hb_000171_040 Hb_000171_040 Hb_084426_010--Hb_000171_040 Hb_000922_310 Hb_000922_310 Hb_084426_010--Hb_000922_310 Hb_000362_240 Hb_000362_240 Hb_084426_010--Hb_000362_240 Hb_003362_060--Hb_131949_010 Hb_003362_060--Hb_000171_040 Hb_184798_040 Hb_184798_040 Hb_003362_060--Hb_184798_040 Hb_034569_020 Hb_034569_020 Hb_003362_060--Hb_034569_020 Hb_004899_280 Hb_004899_280 Hb_003362_060--Hb_004899_280 Hb_131949_010--Hb_184798_040 Hb_131949_010--Hb_000171_040 Hb_131949_010--Hb_034569_020 Hb_131949_010--Hb_004899_280 Hb_022693_150--Hb_000362_240 Hb_000479_120 Hb_000479_120 Hb_022693_150--Hb_000479_120 Hb_000008_050 Hb_000008_050 Hb_022693_150--Hb_000008_050 Hb_001364_020 Hb_001364_020 Hb_022693_150--Hb_001364_020 Hb_022693_150--Hb_000922_310 Hb_006816_510 Hb_006816_510 Hb_000171_040--Hb_006816_510 Hb_000171_040--Hb_184798_040 Hb_005975_020 Hb_005975_020 Hb_000171_040--Hb_005975_020 Hb_000922_310--Hb_034569_020 Hb_000922_310--Hb_004899_280 Hb_046727_010 Hb_046727_010 Hb_000922_310--Hb_046727_010 Hb_080765_020 Hb_080765_020 Hb_000922_310--Hb_080765_020 Hb_000098_280 Hb_000098_280 Hb_000922_310--Hb_000098_280 Hb_007008_020 Hb_007008_020 Hb_000922_310--Hb_007008_020 Hb_000362_240--Hb_000008_050 Hb_000362_240--Hb_000479_120 Hb_059126_010 Hb_059126_010 Hb_000362_240--Hb_059126_010 Hb_001125_030 Hb_001125_030 Hb_000362_240--Hb_001125_030 Hb_000362_240--Hb_001364_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0326235 0.0330449 0 0 0.0655571 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis