Hb_059126_010

Information

Type -
Description -
Location Contig59126: 768-3108
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_059126_010 0.0 - - -
2 Hb_001125_030 0.0712903017 - - conserved hypothetical protein [Ricinus communis]
3 Hb_033225_020 0.0759775182 - - conserved hypothetical protein [Ricinus communis]
4 Hb_029866_010 0.1151138192 - - -
5 Hb_013983_010 0.1521835393 - - hypothetical protein PRUPE_ppa016763mg, partial [Prunus persica]
6 Hb_000008_050 0.1650594159 - - Phenylalanine ammonia-lyase, putative [Ricinus communis]
7 Hb_002983_100 0.1744443227 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF084 [Jatropha curcas]
8 Hb_000362_240 0.2065856705 - - conserved hypothetical protein [Ricinus communis]
9 Hb_007127_010 0.2067805025 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
10 Hb_000345_480 0.2162756701 - - cyclin-dependent protein kinase, putative [Ricinus communis]
11 Hb_005116_020 0.2348285151 - - PREDICTED: DNA repair helicase UVH6 isoform X2 [Sesamum indicum]
12 Hb_001584_230 0.2382635616 - - invertase/pectin methylesterase inhibitor family protein [Populus trichocarpa]
13 Hb_001364_020 0.2395493392 - - -
14 Hb_152587_010 0.242603071 - - -
15 Hb_005867_010 0.2431283493 - - -
16 Hb_114868_010 0.2443720864 - - -
17 Hb_002232_200 0.2447365642 - - PREDICTED: sugar carrier protein C-like [Jatropha curcas]
18 Hb_000153_040 0.2463306568 - - -
19 Hb_081636_010 0.2521814645 - - -
20 Hb_003494_260 0.2556036094 - - -

Gene co-expression network

sample Hb_059126_010 Hb_059126_010 Hb_001125_030 Hb_001125_030 Hb_059126_010--Hb_001125_030 Hb_033225_020 Hb_033225_020 Hb_059126_010--Hb_033225_020 Hb_029866_010 Hb_029866_010 Hb_059126_010--Hb_029866_010 Hb_013983_010 Hb_013983_010 Hb_059126_010--Hb_013983_010 Hb_000008_050 Hb_000008_050 Hb_059126_010--Hb_000008_050 Hb_002983_100 Hb_002983_100 Hb_059126_010--Hb_002983_100 Hb_001125_030--Hb_029866_010 Hb_001125_030--Hb_013983_010 Hb_001125_030--Hb_033225_020 Hb_000345_480 Hb_000345_480 Hb_001125_030--Hb_000345_480 Hb_000153_040 Hb_000153_040 Hb_001125_030--Hb_000153_040 Hb_033225_020--Hb_029866_010 Hb_033225_020--Hb_013983_010 Hb_001584_230 Hb_001584_230 Hb_033225_020--Hb_001584_230 Hb_033225_020--Hb_002983_100 Hb_029866_010--Hb_013983_010 Hb_029866_010--Hb_000345_480 Hb_081636_010 Hb_081636_010 Hb_029866_010--Hb_081636_010 Hb_013983_010--Hb_000345_480 Hb_003494_260 Hb_003494_260 Hb_013983_010--Hb_003494_260 Hb_013983_010--Hb_000153_040 Hb_013983_010--Hb_081636_010 Hb_001364_020 Hb_001364_020 Hb_000008_050--Hb_001364_020 Hb_000362_240 Hb_000362_240 Hb_000008_050--Hb_000362_240 Hb_005867_010 Hb_005867_010 Hb_000008_050--Hb_005867_010 Hb_000038_160 Hb_000038_160 Hb_000008_050--Hb_000038_160 Hb_140049_070 Hb_140049_070 Hb_000008_050--Hb_140049_070 Hb_005116_020 Hb_005116_020 Hb_002983_100--Hb_005116_020 Hb_003320_030 Hb_003320_030 Hb_002983_100--Hb_003320_030 Hb_141838_010 Hb_141838_010 Hb_002983_100--Hb_141838_010 Hb_002983_100--Hb_001125_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.230885 0 0 0 0.788851 0.104217
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis