Hb_081636_010

Information

Type -
Description -
Location Contig81636: 240-596
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_081636_010 0.0 - - -
2 Hb_001135_270 0.0488822281 - - -
3 Hb_005799_030 0.0595518395 - - PREDICTED: uncharacterized protein LOC103926623 [Pyrus x bretschneideri]
4 Hb_001584_230 0.0864125095 - - invertase/pectin methylesterase inhibitor family protein [Populus trichocarpa]
5 Hb_013983_010 0.139496145 - - hypothetical protein PRUPE_ppa016763mg, partial [Prunus persica]
6 Hb_067345_050 0.1419330188 - - PREDICTED: uncharacterized protein LOC104107076 [Nicotiana tomentosiformis]
7 Hb_029866_010 0.1426946276 - - -
8 Hb_000123_390 0.1483870175 - - conserved hypothetical protein [Ricinus communis]
9 Hb_114868_010 0.163981568 - - -
10 Hb_000345_480 0.1649834984 - - cyclin-dependent protein kinase, putative [Ricinus communis]
11 Hb_001899_010 0.1735029077 - - PREDICTED: probable ubiquitin conjugation factor E4 isoform X2 [Jatropha curcas]
12 Hb_179763_010 0.1756834994 - - -
13 Hb_003494_260 0.1827013258 - - -
14 Hb_066784_020 0.1942852856 - - conserved hypothetical protein [Ricinus communis]
15 Hb_075570_010 0.1982085282 - - -
16 Hb_003529_210 0.2014850557 - - -
17 Hb_005116_020 0.2077334527 - - PREDICTED: DNA repair helicase UVH6 isoform X2 [Sesamum indicum]
18 Hb_033225_020 0.2116809448 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001159_210 0.2187717006 - - PREDICTED: MATE efflux family protein DTX1 [Jatropha curcas]
20 Hb_134732_010 0.2194892577 - - -

Gene co-expression network

sample Hb_081636_010 Hb_081636_010 Hb_001135_270 Hb_001135_270 Hb_081636_010--Hb_001135_270 Hb_005799_030 Hb_005799_030 Hb_081636_010--Hb_005799_030 Hb_001584_230 Hb_001584_230 Hb_081636_010--Hb_001584_230 Hb_013983_010 Hb_013983_010 Hb_081636_010--Hb_013983_010 Hb_067345_050 Hb_067345_050 Hb_081636_010--Hb_067345_050 Hb_029866_010 Hb_029866_010 Hb_081636_010--Hb_029866_010 Hb_001135_270--Hb_005799_030 Hb_001135_270--Hb_001584_230 Hb_001135_270--Hb_067345_050 Hb_000123_390 Hb_000123_390 Hb_001135_270--Hb_000123_390 Hb_001899_010 Hb_001899_010 Hb_001135_270--Hb_001899_010 Hb_005799_030--Hb_001584_230 Hb_005799_030--Hb_000123_390 Hb_005799_030--Hb_001899_010 Hb_179763_010 Hb_179763_010 Hb_005799_030--Hb_179763_010 Hb_001584_230--Hb_000123_390 Hb_001584_230--Hb_029866_010 Hb_001584_230--Hb_001899_010 Hb_013983_010--Hb_029866_010 Hb_000345_480 Hb_000345_480 Hb_013983_010--Hb_000345_480 Hb_001125_030 Hb_001125_030 Hb_013983_010--Hb_001125_030 Hb_003494_260 Hb_003494_260 Hb_013983_010--Hb_003494_260 Hb_000153_040 Hb_000153_040 Hb_013983_010--Hb_000153_040 Hb_066784_020 Hb_066784_020 Hb_067345_050--Hb_066784_020 Hb_003529_210 Hb_003529_210 Hb_067345_050--Hb_003529_210 Hb_067345_050--Hb_005799_030 Hb_182310_010 Hb_182310_010 Hb_067345_050--Hb_182310_010 Hb_029866_010--Hb_001125_030 Hb_033225_020 Hb_033225_020 Hb_029866_010--Hb_033225_020 Hb_059126_010 Hb_059126_010 Hb_029866_010--Hb_059126_010 Hb_029866_010--Hb_000345_480
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.259138 0 0 0 0.807507 0.522749
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis